DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PGTPTSS
Uniprot ID:
Q96QT6
Source protein:
PHD finger protein 12
Source gene:
PHF12
Class:
DEG_SCF_FBW7_1
Location:
164:170
E3 ligase:
FBXW7
DEGRON score:
0.9548
ASA_SCORE:
71.6857
COIL:
0.8864
CONS_SCORE:
0.3018
DSS_SCORE:
0.781
HELIX:
0.0546
FCONS_SCORE:
0.8825
RIG_SCORE:
0.525
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P167L
TCGA-69-7979
LUAD
TCGA
PGTPTSS
DEG_SCF_FBW7_1
0.7582
p.P167L
DO23874
LUAD
ICGC
PGTPTSS
DEG_SCF_FBW7_1
0.7582
p.R155Q
TCGA-A5-A0G2
UCEC
TCGA
PGTPTSS
DEG_SCF_FBW7_1
0.0833
p.R155Q
DO41235
UCEC
ICGC
PGTPTSS
DEG_SCF_FBW7_1
0.0833
p.A154T
TCGA-BP-5201
KIRC
TCGA
PGTPTSS
DEG_SCF_FBW7_1
0.0556
p.A154T
DO17206
KIRC
ICGC
PGTPTSS
DEG_SCF_FBW7_1
0.0556
p.A171V
TCGA-BR-4201
STAD
TCGA
PGTPTSS
DEG_SCF_FBW7_1
0.3056
p.A171V
DO38707
STAD
ICGC
PGTPTSS
DEG_SCF_FBW7_1
0.3056
p.S169F
TCGA-DF-A2KU
UCEC
TCGA
PGTPTSS
DEG_SCF_FBW7_1
0.6871
p.S169F
DO223286
UCEC
ICGC
PGTPTSS
DEG_SCF_FBW7_1
0.6871
p.R163S
TCGA-DS-A0VM
CESC
TCGA
PGTPTSS
DEG_SCF_FBW7_1
0.3056
p.R163S
DO6258
CESC
ICGC
PGTPTSS
DEG_SCF_FBW7_1
0.3056
p.A154D
DO229032
LICA
ICGC
PGTPTSS
DEG_SCF_FBW7_1
0.0556
p.E158D
DO50907
LICA
ICGC
PGTPTSS
DEG_SCF_FBW7_1
0.1667
Drug responses associated with PHF12 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PGTPTSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96QT6
PHD finger protein 12
DEG_SCF_FBW7_1
164:170
PGTPTSS
FBXW7
0.9548
More...