DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PGTPVLS
Uniprot ID:
Q96EM0
Source protein:
Trans-3-hydroxy-L-proline dehydratase
Source gene:
L3HYPDH
Class:
DEG_SCF_FBW7_1
Location:
15:21
E3 ligase:
FBXW7
DEGRON score:
0.7966
ASA_SCORE:
46.4143
COIL:
0.606
CONS_SCORE:
0.3329
DSS_SCORE:
0.5218
HELIX:
0.0146
FCONS_SCORE:
0.6446
RIG_SCORE:
0.6795
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G28V
TCGA-73-4658
LUAD
TCGA
PGTPVLS
DEG_SCF_FBW7_1
0.1389
p.G28V
DO23663
LUAD
ICGC
PGTPVLS
DEG_SCF_FBW7_1
0.1389
p.G28S
TCGA-73-4658
LUAD
TCGA
PGTPVLS
DEG_SCF_FBW7_1
0.1389
p.G28S
DO23663
LUAD
ICGC
PGTPVLS
DEG_SCF_FBW7_1
0.1389
p.P15S
TCGA-BF-AAP1
SKCM
TCGA
PGTPVLS
DEG_SCF_FBW7_1
0.6752
p.P15S
DO219464
SKCM
ICGC
PGTPVLS
DEG_SCF_FBW7_1
0.6752
p.D24N
TCGA-VQ-A8P2
STAD
TCGA
PGTPVLS
DEG_SCF_FBW7_1
0.25
p.D24N
DO51761
STAD
ICGC
PGTPVLS
DEG_SCF_FBW7_1
0.25
p.D13G
DO25290
LUAD
ICGC
PGTPVLS
DEG_SCF_FBW7_1
0.2778
p.G18S
DO32778
PAAD
ICGC
PGTPVLS
DEG_SCF_FBW7_1
0.6993
p.Y21F
DO227681
SKCA
ICGC
PGTPVLS
DEG_SCF_FBW7_1
0.7528
p.M11I
DO48172
UCEC
ICGC
PGTPVLS
DEG_SCF_FBW7_1
0.2222
p.F20C
ACH-001664
Gastric Cancer
CCLE
PGTPVLS
DEG_SCF_FBW7_1
0.7108
Drug responses associated with L3HYPDH mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PGTPVLS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96EM0
Trans-3-hydroxy-L-proline dehydratase
DEG_SCF_FBW7_1
15:21
PGTPVLS
FBXW7
0.7966
More...