DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PGVTPKQS
Uniprot ID:
P19021
Source protein:
Peptidyl-glycine alpha-amidating monooxygenase
Source gene:
PAM
Class:
DEG_SCF_FBW7_1
Location:
64:71
E3 ligase:
FBXW7
DEGRON score:
0.527
ASA_SCORE:
69.325
COIL:
0.8884
CONS_SCORE:
0.4383
DSS_SCORE:
0.2983
HELIX:
0.0063
FCONS_SCORE:
1.1696
RIG_SCORE:
0.7439
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R62C
TCGA-14-1451
GBM
TCGA
PGVTPKQS
DEG_SCF_FBW7_1
0.2778
p.R62C
TCGA-AN-A046
BRCA
TCGA
PGVTPKQS
DEG_SCF_FBW7_1
0.2778
p.R62C
DO1285
BRCA
ICGC
PGVTPKQS
DEG_SCF_FBW7_1
0.2778
p.R62C
DO13384
GBM
ICGC
PGVTPKQS
DEG_SCF_FBW7_1
0.2778
p.A58V
TCGA-AP-A051
UCEC
TCGA
PGVTPKQS
DEG_SCF_FBW7_1
0.1667
p.A58V
DO42673
UCEC
ICGC
PGVTPKQS
DEG_SCF_FBW7_1
0.1667
p.D56Y
TCGA-B5-A11E
UCEC
TCGA
PGVTPKQS
DEG_SCF_FBW7_1
0.1111
p.D56Y
DO41644
UCEC
ICGC
PGVTPKQS
DEG_SCF_FBW7_1
0.1111
p.R80P
TCGA-BH-A0AW
BRCA
TCGA
PGVTPKQS
DEG_SCF_FBW7_1
0.0833
p.R80P
DO5005
BRCA
ICGC
PGVTPKQS
DEG_SCF_FBW7_1
0.0833
p.S55L
TCGA-D3-A3MV
SKCM
TCGA
PGVTPKQS
DEG_SCF_FBW7_1
0.0833
p.S55L
DO37727
SKCM
ICGC
PGVTPKQS
DEG_SCF_FBW7_1
0.0833
p.S71Y
TCGA-EP-A2KB
LIHC
TCGA
PGVTPKQS
DEG_SCF_FBW7_1
0.712
p.S71Y
DO22932
LIHC
ICGC
PGVTPKQS
DEG_SCF_FBW7_1
0.712
p.M63I
TCGA-GS-A9U3
DLBC
TCGA
PGVTPKQS
DEG_SCF_FBW7_1
0.3056
p.M63I
DO219919
DLBC
ICGC
PGVTPKQS
DEG_SCF_FBW7_1
0.3056
p.D72N
TCGA-IA-A40U
KIRP
TCGA
PGVTPKQS
DEG_SCF_FBW7_1
0.3056
p.D72N
DO44482
KIRP
ICGC
PGVTPKQS
DEG_SCF_FBW7_1
0.3056
p.D60Y
DO229029
LICA
ICGC
PGVTPKQS
DEG_SCF_FBW7_1
0.2222
p.R80L
DO229024
LICA
ICGC
PGVTPKQS
DEG_SCF_FBW7_1
0.0833
p.R62P
DO52686
MALY
ICGC
PGVTPKQS
DEG_SCF_FBW7_1
0.2778
p.A76T
DO222502
MELA
ICGC
PGVTPKQS
DEG_SCF_FBW7_1
0.1944
p.G72E
DO229453
SKCA
ICGC
PGVTPKQS
DEG_SCF_FBW7_1
0.3056
p.R80Q
DO229502
SKCA
ICGC
PGVTPKQS
DEG_SCF_FBW7_1
0.0833
p.H70Y
DO229248
THCA
ICGC
PGVTPKQS
DEG_SCF_FBW7_1
0.7229
p.F65S
DO42600
UCEC
ICGC
PGVTPKQS
DEG_SCF_FBW7_1
0.7982
Drug responses associated with PAM mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PGVTPKQS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P19021
Peptidyl-glycine alpha-amidating monooxygenase
DEG_SCF_FBW7_1
64:71
PGVTPKQS
FBXW7
0.527
More...