DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PKDTPFST
Uniprot ID:
Q2TBC4
Source protein:
Prickle-like protein 4
Source gene:
PRICKLE4
Class:
DEG_SCF_FBW7_1
Location:
294:301
E3 ligase:
FBXW7
DEGRON score:
0.9523
ASA_SCORE:
81.15
COIL:
0.825
CONS_SCORE:
0.3124
DSS_SCORE:
0.6453
HELIX:
0.1396
FCONS_SCORE:
0.8153
RIG_SCORE:
0.6563
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P294S
DO45055
LINC
ICGC
PKDTPFST
DEG_SCF_FBW7_1
0.6752
p.P298S
NKM-1
haematopoietic_and_lymphoid_tissue
COSMIC
PKDTPFST
DEG_SCF_FBW7_1
0.6752
p.G293V
DO228986
LICA
ICGC
PKDTPFST
DEG_SCF_FBW7_1
0.3056
p.G293V
SIDM00488
Colorectal Carcinoma
GDSC
PKDTPFST
DEG_SCF_FBW7_1
0.3056
p.G293V
SIDM00380
Acute Myeloid Leukemia
GDSC
PKDTPFST
DEG_SCF_FBW7_1
0.3056
p.G293V
SIDM00173
Head and Neck Carcinoma
GDSC
PKDTPFST
DEG_SCF_FBW7_1
0.3056
p.A290S
DO229034
LICA
ICGC
PKDTPFST
DEG_SCF_FBW7_1
0.2222
p.S306R
SIDM00496
Thyroid Gland Carcinoma
GDSC
PKDTPFST
DEG_SCF_FBW7_1
0.1944
p.S306R
SIDM00375
Head and Neck Carcinoma
GDSC
PKDTPFST
DEG_SCF_FBW7_1
0.1944
p.S306R
SIDM00325
Esophageal Squamous Cell Carcinoma
GDSC
PKDTPFST
DEG_SCF_FBW7_1
0.1944
p.S306R
SIDM01728
Endometrial Carcinoma
GDSC
PKDTPFST
DEG_SCF_FBW7_1
0.1944
p.S306R
SIDM01735
Biliary Tract Carcinoma
GDSC
PKDTPFST
DEG_SCF_FBW7_1
0.1944
p.S306R
SIDM01682
Gastric Carcinoma
GDSC
PKDTPFST
DEG_SCF_FBW7_1
0.1944
p.S306R
SIDM01611
Endometrial Carcinoma
GDSC
PKDTPFST
DEG_SCF_FBW7_1
0.1944
p.S287L
DO229013
COCA
ICGC
PKDTPFST
DEG_SCF_FBW7_1
0.1389
p.S287L
DO229003
COCA
ICGC
PKDTPFST
DEG_SCF_FBW7_1
0.1389
p.P308R
NCI-H1563
lung
COSMIC
PKDTPFST
DEG_SCF_FBW7_1
0.1389
p.E310D
TCGA-AG-A002
READ
TCGA
PKDTPFST
DEG_SCF_FBW7_1
0.0833
p.E310D
TCGA-BS-A0UV
UCEC
TCGA
PKDTPFST
DEG_SCF_FBW7_1
0.0833
p.E310D
DO42793
UCEC
ICGC
PKDTPFST
DEG_SCF_FBW7_1
0.0833
p.E310D
SIDM01611
Endometrial Carcinoma
GDSC
PKDTPFST
DEG_SCF_FBW7_1
0.0833
p.E310D
ACH-000996
Endometrial/Uterine Cancer
CCLE
PKDTPFST
DEG_SCF_FBW7_1
0.0833
p.R310H
DO219787
UCEC
ICGC
PKDTPFST
DEG_SCF_FBW7_1
0.0833
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Drug responses associated with PRICKLE4 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of PKDTPFST
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q2TBC4
Prickle-like protein 4
DEG_SCF_FBW7_1
294:301
PKDTPFST
FBXW7
0.9523
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