DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PKTPTGS
Uniprot ID:
Q8NHM5
Source protein:
Lysine-specific demethylase 2B
Source gene:
KDM2B
Class:
DEG_SCF_FBW7_1
Location:
491:497
E3 ligase:
FBXW7
DEGRON score:
0.9976
ASA_SCORE:
69.6286
COIL:
0.8693
CONS_SCORE:
0.2907
DSS_SCORE:
0.478
HELIX:
0.044
FCONS_SCORE:
0.9624
RIG_SCORE:
0.6556
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P494L
TCGA-90-A4ED
LUSC
TCGA
PKTPTGS
DEG_SCF_FBW7_1
0.7582
p.P494L
DO45482
LUSC
ICGC
PKTPTGS
DEG_SCF_FBW7_1
0.7582
p.K492N
TCGA-B5-A0JY
UCEC
TCGA
PKTPTGS
DEG_SCF_FBW7_1
0.5806
p.K492N
DO43041
UCEC
ICGC
PKTPTGS
DEG_SCF_FBW7_1
0.5806
p.E501D
TCGA-CC-A8HT
LIHC
TCGA
PKTPTGS
DEG_SCF_FBW7_1
0.2222
p.E501D
DO52187
LIHC
ICGC
PKTPTGS
DEG_SCF_FBW7_1
0.2222
p.G498D
DO8400
COAD
ICGC
PKTPTGS
DEG_SCF_FBW7_1
0.3056
p.P502T
DO228985
LICA
ICGC
PKTPTGS
DEG_SCF_FBW7_1
0.1944
p.A496E
DO229026
LICA
ICGC
PKTPTGS
DEG_SCF_FBW7_1
0.7701
p.T495P
DO49184
PACA
ICGC
PKTPTGS
DEG_SCF_FBW7_1
0.7031
p.P503H
DO219774
UCEC
ICGC
PKTPTGS
DEG_SCF_FBW7_1
0.6111
p.A496V
DO41752
UCEC
ICGC
PKTPTGS
DEG_SCF_FBW7_1
0.6936
p.S504Y
DO41680
UCEC
ICGC
PKTPTGS
DEG_SCF_FBW7_1
0.1389
p.R499H
DO43891
UCEC
ICGC
PKTPTGS
DEG_SCF_FBW7_1
0.2778
p.T500P
ACH-002282
Neuroblastoma
CCLE
PKTPTGS
DEG_SCF_FBW7_1
0.6944
p.T500P
ACH-002340
Neuroblastoma
CCLE
PKTPTGS
DEG_SCF_FBW7_1
0.6944
p.T500P
NB17
autonomic_ganglia
COSMIC
PKTPTGS
DEG_SCF_FBW7_1
0.6944
p.T500P
NBsusSR
autonomic_ganglia
COSMIC
PKTPTGS
DEG_SCF_FBW7_1
0.6944
p.V490M
SW48
large_intestine
COSMIC
PKTPTGS
DEG_SCF_FBW7_1
0.3056
p.G488D
MOLT-4
haematopoietic_and_lymphoid_tissue
COSMIC
PKTPTGS
DEG_SCF_FBW7_1
0.25
p.R504Q
RL95-2
endometrium
COSMIC
PKTPTGS
DEG_SCF_FBW7_1
0.1389
p.L496F
NCI-H1770
lung
COSMIC
PKTPTGS
DEG_SCF_FBW7_1
0.6981
Drug responses associated with KDM2B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PKTPTGS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8NHM5
Lysine-specific demethylase 2B
DEG_SCF_FBW7_1
491:497
PKTPTGS
FBXW7
0.9976
More...