DegronMD: protein-targeted degradation, mutation and drug response to degrons
Home
(current)
Browse
Proteins/Degrons
Mutations
Drug response
Network-rewiring
Drug resistance
Search
Tutorial
Download
Contact
Links
BSML
CPH
CGC
Degron:
PLATPPNT
Uniprot ID:
Q5THJ4
Source protein:
Intermembrane lipid transfer protein VPS13D
Source gene:
VPS13D
Class:
DEG_SCF_FBW7_1
Location:
771:778
E3 ligase:
FBXW7
DEGRON score:
0.9959
ASA_SCORE:
84.775
COIL:
0.944
CONS_SCORE:
0.3114
DSS_SCORE:
0.8393
HELIX:
0.0264
FCONS_SCORE:
1.1277
RIG_SCORE:
0.5599
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A773V
TCGA-B5-A3FA
UCEC
TCGA
PLATPPNT
DEG_SCF_FBW7_1
0.5825
p.A773V
DO52402
UCEC
ICGC
PLATPPNT
DEG_SCF_FBW7_1
0.5825
p.E767K
DO11854
GBM
ICGC
PLATPPNT
DEG_SCF_FBW7_1
0.2222
p.P771L
DO229459
SKCA
ICGC
PLATPPNT
DEG_SCF_FBW7_1
0.6471
Drug responses associated with VPS13D mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PLATPPNT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5THJ4
Intermembrane lipid transfer protein VPS13D
DEG_SCF_FBW7_1
771:778
PLATPPNT
FBXW7
0.9959
More...