DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PLGTPAHS
Uniprot ID:
Q9UKJ3
Source protein:
G patch domain-containing protein 8
Source gene:
GPATCH8
Class:
DEG_SCF_FBW7_1
Location:
1223:1230
E3 ligase:
FBXW7
DEGRON score:
0.9766
ASA_SCORE:
84.6875
COIL:
0.9399
CONS_SCORE:
0.5018
DSS_SCORE:
0.6494
HELIX:
0.0329
FCONS_SCORE:
0.9985
RIG_SCORE:
0.5974
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D1218N
TCGA-4Z-AA7R
BLCA
TCGA
PLGTPAHS
DEG_SCF_FBW7_1
0.1944
p.A1225V
DO233944
GACA
ICGC
PLGTPAHS
DEG_SCF_FBW7_1
0.6936
p.A1225V
DO232761
PBCA
ICGC
PLGTPAHS
DEG_SCF_FBW7_1
0.6936
p.A1225V
DO38619
STAD
ICGC
PLGTPAHS
DEG_SCF_FBW7_1
0.6936
p.P1236H
DO228908
LICA
ICGC
PLGTPAHS
DEG_SCF_FBW7_1
0.1667
p.P1231T
DO229032
LICA
ICGC
PLGTPAHS
DEG_SCF_FBW7_1
0.3056
p.E1238D
DO50890
LICA
ICGC
PLGTPAHS
DEG_SCF_FBW7_1
0.1111
p.P1236L
DO47282
SKCM
ICGC
PLGTPAHS
DEG_SCF_FBW7_1
0.1667
p.D1236G
SIDM01113
Other Sarcomas
GDSC
PLGTPAHS
DEG_SCF_FBW7_1
0.1667
p.D1236G
SIDM00755
Non-Small Cell Lung Carcinoma
GDSC
PLGTPAHS
DEG_SCF_FBW7_1
0.1667
p.D1236G
SK-UT-1
soft_tissue
COSMIC
PLGTPAHS
DEG_SCF_FBW7_1
0.1667
p.D1236G
NCI-H1793
lung
COSMIC
PLGTPAHS
DEG_SCF_FBW7_1
0.1667
p.A1217V
SIDM00217
Colorectal Carcinoma
GDSC
PLGTPAHS
DEG_SCF_FBW7_1
0.1667
p.A1217V
SIDM01618
B-Lymphoblastic Leukemia
GDSC
PLGTPAHS
DEG_SCF_FBW7_1
0.1667
p.A1217V
ACH-000942
Leukemia
CCLE
PLGTPAHS
DEG_SCF_FBW7_1
0.1667
p.A1217V
ACH-000999
Colon/Colorectal Cancer
CCLE
PLGTPAHS
DEG_SCF_FBW7_1
0.1667
p.A1217V
SNU-1040
large_intestine
COSMIC
PLGTPAHS
DEG_SCF_FBW7_1
0.1667
Drug responses associated with GPATCH8 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PLGTPAHS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9UKJ3
G patch domain-containing protein 8
DEG_SCF_FBW7_1
1223:1230
PLGTPAHS
FBXW7
0.9766
More...