DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PLLTPLSE
Uniprot ID:
Q9H0K4
Source protein:
Radial spoke head protein 6 homolog A
Source gene:
RSPH6A
Class:
DEG_SCF_FBW7_2
Location:
590:597
E3 ligase:
FBXW7
DEGRON score:
0.9989
ASA_SCORE:
67.275
COIL:
0.753
CONS_SCORE:
0.6721
DSS_SCORE:
0.5806
HELIX:
0.0847
FCONS_SCORE:
1.2388
RIG_SCORE:
0.73
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P606L
TCGA-D5-6928
COAD
TCGA
PLLTPLSE
DEG_SCF_FBW7_2
0.0833
p.M602V
TCGA-DX-A2IZ
SARC
TCGA
PLLTPLSE
DEG_SCF_FBW7_2
0.1944
p.H603Y
TCGA-J4-8198
PRAD
TCGA
PLLTPLSE
DEG_SCF_FBW7_2
0.1667
p.A599T
SIDM00793
Burkitt's Lymphoma
GDSC
PLLTPLSE
DEG_SCF_FBW7_2
0.2778
p.A599T
ACH-002236
Lymphoma
CCLE
PLLTPLSE
DEG_SCF_FBW7_2
0.2778
p.A599T
EB-3
haematopoietic_and_lymphoid_tissue
COSMIC
PLLTPLSE
DEG_SCF_FBW7_2
0.2778
p.L604V
SIDM00387
Neuroblastoma
GDSC
PLLTPLSE
DEG_SCF_FBW7_2
0.1389
p.L604V
ACH-000078
Neuroblastoma
CCLE
PLLTPLSE
DEG_SCF_FBW7_2
0.1389
p.L604V
MHH-NB-11
autonomic_ganglia
COSMIC
PLLTPLSE
DEG_SCF_FBW7_2
0.1389
Drug responses associated with RSPH6A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PLLTPLSE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9H0K4
Radial spoke head protein 6 homolog A
DEG_SCF_FBW7_2
590:597
PLLTPLSE
FBXW7
0.9989
More...