DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PLR
Uniprot ID:
Q9NP62
Source protein:
Chorion-specific transcription factor GCMa
Source gene:
GCM1
Class:
DEG_APCC_TPR_1
Location:
434:436
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8833
ASA_SCORE:
119.4
COIL:
0.9057
CONS_SCORE:
0.4078
DSS_SCORE:
0.6166
HELIX:
0.0383
FCONS_SCORE:
0.9889
RIG_SCORE:
0.8435
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R436K
TCGA-37-3783
LUSC
TCGA
PLR
DEG_APCC_TPR_1
0.7237
p.R436K
DO26734
LUSC
ICGC
PLR
DEG_APCC_TPR_1
0.7237
p.P434H
DO234199
ESAD
ICGC
PLR
DEG_APCC_TPR_1
0.6583
p.C433Y
TCGA-CJ-4902
KIRC
TCGA
PLR
DEG_APCC_TPR_1
0.3056
p.C433Y
DO17693
KIRC
ICGC
PLR
DEG_APCC_TPR_1
0.3056
p.N431K
TCGA-77-A5G3
LUSC
TCGA
PLR
DEG_APCC_TPR_1
0.25
p.N431K
DO45456
LUSC
ICGC
PLR
DEG_APCC_TPR_1
0.25
p.M428T
TCGA-LI-A67I
SARC
TCGA
PLR
DEG_APCC_TPR_1
0.1667
p.M428T
DO220201
SARC
ICGC
PLR
DEG_APCC_TPR_1
0.1667
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Drug responses associated with GCM1 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
No data available in table
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All proteins holding degron of PLR
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9NP62
Chorion-specific transcription factor GCMa
DEG_APCC_TPR_1
434:436
PLR
APC,CDC20,FZR1
0.8833
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