DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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Degron:
PLR
Uniprot ID:
Q9NP62
Source protein:
Chorion-specific transcription factor GCMa
Source gene:
GCM1
Class:
DEG_APCC_TPR_1
Location:
434:436
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8833
ASA_SCORE:
119.4
COIL:
0.9057
CONS_SCORE:
0.4078
DSS_SCORE:
0.6166
HELIX:
0.0383
FCONS_SCORE:
0.9889
RIG_SCORE:
0.8435
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R436K
TCGA-37-3783
LUSC
TCGA
PLR
DEG_APCC_TPR_1
0.7237
p.R436K
DO26734
LUSC
ICGC
PLR
DEG_APCC_TPR_1
0.7237
p.N431K
TCGA-77-A5G3
LUSC
TCGA
PLR
DEG_APCC_TPR_1
0.25
p.N431K
DO45456
LUSC
ICGC
PLR
DEG_APCC_TPR_1
0.25
p.C433Y
TCGA-CJ-4902
KIRC
TCGA
PLR
DEG_APCC_TPR_1
0.3056
p.C433Y
DO17693
KIRC
ICGC
PLR
DEG_APCC_TPR_1
0.3056
p.M428T
TCGA-LI-A67I
SARC
TCGA
PLR
DEG_APCC_TPR_1
0.1667
p.M428T
DO220201
SARC
ICGC
PLR
DEG_APCC_TPR_1
0.1667
p.P434H
DO234199
ESAD
ICGC
PLR
DEG_APCC_TPR_1
0.6583
Drug responses associated with GCM1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PLR
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9NP62
Chorion-specific transcription factor GCMa
DEG_APCC_TPR_1
434:436
PLR
APC,CDC20,FZR1
0.8833
More...