DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PLTPDDT
Uniprot ID:
Q17R60
Source protein:
Interphotoreceptor matrix proteoglycan 1
Source gene:
IMPG1
Class:
DEG_SCF_FBW7_1
Location:
198:204
E3 ligase:
FBXW7
DEGRON score:
0.9946
ASA_SCORE:
74.3714
COIL:
0.8284
CONS_SCORE:
0.5677
DSS_SCORE:
0.36
HELIX:
0.1204
FCONS_SCORE:
1.1657
RIG_SCORE:
0.7882
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A190V
TCGA-06-6700
GBM
TCGA
PLTPDDT
DEG_SCF_FBW7_1
0.1111
p.A190V
DO12850
GBM
ICGC
PLTPDDT
DEG_SCF_FBW7_1
0.1111
p.L210F
TCGA-A5-A2K5
UCEC
TCGA
PLTPDDT
DEG_SCF_FBW7_1
0.1667
p.L210F
DO41379
UCEC
ICGC
PLTPDDT
DEG_SCF_FBW7_1
0.1667
p.V192I
TCGA-AA-3489
COAD
TCGA
PLTPDDT
DEG_SCF_FBW7_1
0.1667
p.V192I
DO10702
COAD
ICGC
PLTPDDT
DEG_SCF_FBW7_1
0.1667
p.G195A
TCGA-AF-4110
READ
TCGA
PLTPDDT
DEG_SCF_FBW7_1
0.25
p.G195A
DO37380
READ
ICGC
PLTPDDT
DEG_SCF_FBW7_1
0.25
p.D188Y
TCGA-D3-A2JD
SKCM
TCGA
PLTPDDT
DEG_SCF_FBW7_1
0.0556
p.L210I
TCGA-EO-A22X
UCEC
TCGA
PLTPDDT
DEG_SCF_FBW7_1
0.1667
p.L210I
TCGA-FI-A2D5
UCEC
TCGA
PLTPDDT
DEG_SCF_FBW7_1
0.1667
p.L210I
DO43907
UCEC
ICGC
PLTPDDT
DEG_SCF_FBW7_1
0.1667
p.L210I
DO41331
UCEC
ICGC
PLTPDDT
DEG_SCF_FBW7_1
0.1667
p.E208K
TCGA-ER-A3PL
SKCM
TCGA
PLTPDDT
DEG_SCF_FBW7_1
0.2222
p.E208K
DO231016
LUSC
ICGC
PLTPDDT
DEG_SCF_FBW7_1
0.2222
p.E208K
DO37495
SKCM
ICGC
PLTPDDT
DEG_SCF_FBW7_1
0.2222
p.G195W
TCGA-FS-A1ZG
SKCM
TCGA
PLTPDDT
DEG_SCF_FBW7_1
0.25
p.G195W
DO37523
SKCM
ICGC
PLTPDDT
DEG_SCF_FBW7_1
0.25
p.P198S
TCGA-G5-6641
READ
TCGA
PLTPDDT
DEG_SCF_FBW7_1
0.6752
p.P198S
DO36909
READ
ICGC
PLTPDDT
DEG_SCF_FBW7_1
0.6752
p.L194I
TCGA-HP-A5MZ
LIHC
TCGA
PLTPDDT
DEG_SCF_FBW7_1
0.2222
p.L194I
DO229026
LICA
ICGC
PLTPDDT
DEG_SCF_FBW7_1
0.2222
p.L194I
DO49695
LIHC
ICGC
PLTPDDT
DEG_SCF_FBW7_1
0.2222
p.P196S
TCGA-YF-AA3M
BLCA
TCGA
PLTPDDT
DEG_SCF_FBW7_1
0.2778
p.P196S
DO51952
BLCA
ICGC
PLTPDDT
DEG_SCF_FBW7_1
0.2778
p.D203E
DO228985
LICA
ICGC
PLTPDDT
DEG_SCF_FBW7_1
0.5647
p.T213K
DO229031
LICA
ICGC
PLTPDDT
DEG_SCF_FBW7_1
0.5278
p.L206I
DO229035
LICA
ICGC
PLTPDDT
DEG_SCF_FBW7_1
0.2778
p.A190S
DO229264
THCA
ICGC
PLTPDDT
DEG_SCF_FBW7_1
0.1111
p.D211N
SIDM01088
Endometrial Carcinoma
GDSC
PLTPDDT
DEG_SCF_FBW7_1
0.1389
p.D211H
SIDM00793
Burkitt's Lymphoma
GDSC
PLTPDDT
DEG_SCF_FBW7_1
0.1389
p.D211H
ACH-002236
Lymphoma
CCLE
PLTPDDT
DEG_SCF_FBW7_1
0.1389
p.D211H
EB-3
haematopoietic_and_lymphoid_tissue
COSMIC
PLTPDDT
DEG_SCF_FBW7_1
0.1389
p.N191K
SIDM00312
Plasma Cell Myeloma
GDSC
PLTPDDT
DEG_SCF_FBW7_1
0.1389
p.N191K
ACH-000183
Myeloma
CCLE
PLTPDDT
DEG_SCF_FBW7_1
0.1389
p.N191K
L-363
haematopoietic_and_lymphoid_tissue
COSMIC
PLTPDDT
DEG_SCF_FBW7_1
0.1389
p.N191S
SIDM01372
Pancreatic Carcinoma
GDSC
PLTPDDT
DEG_SCF_FBW7_1
0.1389
p.P212Q
NCI-H661
lung
COSMIC
PLTPDDT
DEG_SCF_FBW7_1
0.1111
p.L190I
MDA-MB-415
breast
COSMIC
PLTPDDT
DEG_SCF_FBW7_1
0.1111
Drug responses associated with IMPG1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PLTPDDT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q17R60
Interphotoreceptor matrix proteoglycan 1
DEG_SCF_FBW7_1
198:204
PLTPDDT
FBXW7
0.9946
More...