DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PLTPGTS
Uniprot ID:
Q9UPA5
Source protein:
Protein bassoon
Source gene:
BSN
Class:
DEG_SCF_FBW7_1
Location:
1307:1313
E3 ligase:
FBXW7
DEGRON score:
0.9627
ASA_SCORE:
87.1714
COIL:
0.9577
CONS_SCORE:
1
DSS_SCORE:
0.6992
HELIX:
0.0104
FCONS_SCORE:
1.024
RIG_SCORE:
0.5916
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A1318V
TCGA-D3-A8GM
SKCM
TCGA
PLTPGTS
DEG_SCF_FBW7_1
0.1944
p.A1318V
DO50288
SKCM
ICGC
PLTPGTS
DEG_SCF_FBW7_1
0.1944
p.P1310S
TCGA-DA-A3F8
SKCM
TCGA
PLTPGTS
DEG_SCF_FBW7_1
0.6752
p.P1310S
DO37418
SKCM
ICGC
PLTPGTS
DEG_SCF_FBW7_1
0.6752
p.T1312I
TCGA-EE-A20H
SKCM
TCGA
PLTPGTS
DEG_SCF_FBW7_1
0.5966
p.T1312I
DO37986
SKCM
ICGC
PLTPGTS
DEG_SCF_FBW7_1
0.5966
p.P1307S
DO233935
GACA
ICGC
PLTPGTS
DEG_SCF_FBW7_1
0.6752
p.P1314H
SIDM00422
Hodgkin's Lymphoma
GDSC
PLTPGTS
DEG_SCF_FBW7_1
0.3056
p.P1314H
SUP-HD1
haematopoietic_and_lymphoid_tissue
COSMIC
PLTPGTS
DEG_SCF_FBW7_1
0.3056
p.S1322P
SIDM00217
Colorectal Carcinoma
GDSC
PLTPGTS
DEG_SCF_FBW7_1
0.0833
p.S1322P
ACH-000999
Colon/Colorectal Cancer
CCLE
PLTPGTS
DEG_SCF_FBW7_1
0.0833
p.S1322P
SNU-1040
large_intestine
COSMIC
PLTPGTS
DEG_SCF_FBW7_1
0.0833
Drug responses associated with BSN mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PLTPGTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9UPA5
Protein bassoon
DEG_SCF_FBW7_1
1307:1313
PLTPGTS
FBXW7
0.9627
More...