DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PLTPLSE
Uniprot ID:
P05160
Source protein:
Coagulation factor XIII B chain
Source gene:
F13B
Class:
DEG_SCF_FBW7_2
Location:
494:500
E3 ligase:
FBXW7
DEGRON score:
0.7511
ASA_SCORE:
78.7571
COIL:
0.7753
CONS_SCORE:
0.5027
DSS_SCORE:
0.1788
HELIX:
0.0423
FCONS_SCORE:
0.8654
RIG_SCORE:
0.7984
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.N506K
TCGA-22-5478
LUSC
TCGA
PLTPLSE
DEG_SCF_FBW7_2
0.1667
p.N506K
DO27011
LUSC
ICGC
PLTPLSE
DEG_SCF_FBW7_2
0.1667
p.P497S
TCGA-60-2724
LUSC
TCGA
PLTPLSE
DEG_SCF_FBW7_2
0.6752
p.P497S
DO26540
LUSC
ICGC
PLTPLSE
DEG_SCF_FBW7_2
0.6752
p.V503L
TCGA-64-5779
LUAD
TCGA
PLTPLSE
DEG_SCF_FBW7_2
0.25
p.V503L
DO24930
LUAD
ICGC
PLTPLSE
DEG_SCF_FBW7_2
0.25
p.L492S
TCGA-68-7755
LUSC
TCGA
PLTPLSE
DEG_SCF_FBW7_2
0.2778
p.L492S
DO26512
LUSC
ICGC
PLTPLSE
DEG_SCF_FBW7_2
0.2778
p.V510A
TCGA-AJ-A8CW
UCEC
TCGA
PLTPLSE
DEG_SCF_FBW7_2
0.0556
p.V510A
DO52400
UCEC
ICGC
PLTPLSE
DEG_SCF_FBW7_2
0.0556
p.G508R
TCGA-D3-A8GM
SKCM
TCGA
PLTPLSE
DEG_SCF_FBW7_2
0.1111
p.G508R
DO50288
SKCM
ICGC
PLTPLSE
DEG_SCF_FBW7_2
0.1111
p.Q504R
TCGA-E1-A7Z3
LGG
TCGA
PLTPLSE
DEG_SCF_FBW7_2
0.2222
p.Q504R
DO219805
LGG
ICGC
PLTPLSE
DEG_SCF_FBW7_2
0.2222
p.D491Y
TCGA-EI-6917
READ
TCGA
PLTPLSE
DEG_SCF_FBW7_2
0.25
p.D491Y
DO36881
READ
ICGC
PLTPLSE
DEG_SCF_FBW7_2
0.25
p.P494L
TCGA-GN-A4U4
SKCM
TCGA
PLTPLSE
DEG_SCF_FBW7_2
0.6471
p.P494L
DO51256
SKCM
ICGC
PLTPLSE
DEG_SCF_FBW7_2
0.6471
p.L492V
TCGA-JY-A93D
ESCA
TCGA
PLTPLSE
DEG_SCF_FBW7_2
0.2778
p.L492V
DO233158
GACA
ICGC
PLTPLSE
DEG_SCF_FBW7_2
0.2778
p.L492V
SIDM02031
Esophageal Carcinoma
GDSC
PLTPLSE
DEG_SCF_FBW7_2
0.2778
p.P494Q
DO229019
LICA
ICGC
PLTPLSE
DEG_SCF_FBW7_2
0.7035
p.Y490S
DO220855
MELA
ICGC
PLTPLSE
DEG_SCF_FBW7_2
0.2222
p.S493F
DO222405
MELA
ICGC
PLTPLSE
DEG_SCF_FBW7_2
0.3056
p.G489E
DO229470
SKCA
ICGC
PLTPLSE
DEG_SCF_FBW7_2
0.1944
p.G489E
SIDM00795
Melanoma
GDSC
PLTPLSE
DEG_SCF_FBW7_2
0.1944
p.G489E
ACH-000219
Skin Cancer
CCLE
PLTPLSE
DEG_SCF_FBW7_2
0.1944
p.G489E
ACH-002001
Skin Cancer
CCLE
PLTPLSE
DEG_SCF_FBW7_2
0.1944
p.G489E
ACH-002002
Skin Cancer
CCLE
PLTPLSE
DEG_SCF_FBW7_2
0.1944
p.G489E
ACH-002003
Skin Cancer
CCLE
PLTPLSE
DEG_SCF_FBW7_2
0.1944
p.G489E
A375
skin
COSMIC
PLTPLSE
DEG_SCF_FBW7_2
0.1944
Drug responses associated with F13B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PLTPLSE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P05160
Coagulation factor XIII B chain
DEG_SCF_FBW7_2
494:500
PLTPLSE
FBXW7
0.7511
More...