DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PLTPLWT
Uniprot ID:
Q6ZVC0
Source protein:
Neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter 1
Source gene:
NYAP1
Class:
DEG_SCF_FBW7_1
Location:
544:550
E3 ligase:
FBXW7
DEGRON score:
0.8496
ASA_SCORE:
90.9429
COIL:
0.9023
CONS_SCORE:
0.6725
DSS_SCORE:
0.3195
HELIX:
0.0469
FCONS_SCORE:
1.0338
RIG_SCORE:
0.7829
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S536R
TCGA-BR-8382
STAD
TCGA
PLTPLWT
DEG_SCF_FBW7_1
0.1111
p.S536R
DO47925
STAD
ICGC
PLTPLWT
DEG_SCF_FBW7_1
0.1111
p.L537F
TCGA-DA-A95Z
SKCM
TCGA
PLTPLWT
DEG_SCF_FBW7_1
0.1389
p.L537F
DO219481
SKCM
ICGC
PLTPLWT
DEG_SCF_FBW7_1
0.1389
p.R560I
TCGA-E6-A1LX
UCEC
TCGA
PLTPLWT
DEG_SCF_FBW7_1
0.0556
p.D539N
TCGA-EB-A41A
SKCM
TCGA
PLTPLWT
DEG_SCF_FBW7_1
0.1944
p.D539N
DO37429
SKCM
ICGC
PLTPLWT
DEG_SCF_FBW7_1
0.1944
p.D539N
DO37406
SKCM
ICGC
PLTPLWT
DEG_SCF_FBW7_1
0.1944
p.V542L
TCGA-EL-A3MX
THCA
TCGA
PLTPLWT
DEG_SCF_FBW7_1
0.2778
p.V542L
DO49028
THCA
ICGC
PLTPLWT
DEG_SCF_FBW7_1
0.2778
p.S547F
DO233899
GACA
ICGC
PLTPLWT
DEG_SCF_FBW7_1
0.7982
p.V551F
DO229027
LICA
ICGC
PLTPLWT
DEG_SCF_FBW7_1
0.75
p.A549S
DO229034
LICA
ICGC
PLTPLWT
DEG_SCF_FBW7_1
0.7588
p.A555T
DO229047
LICA
ICGC
PLTPLWT
DEG_SCF_FBW7_1
0.1944
p.G540W
DO24596
LUAD
ICGC
PLTPLWT
DEG_SCF_FBW7_1
0.2222
p.G540W
DO41999
UCEC
ICGC
PLTPLWT
DEG_SCF_FBW7_1
0.2222
p.Q534H
DO26959
LUSC
ICGC
PLTPLWT
DEG_SCF_FBW7_1
0.0556
p.Y551S
DO229485
SKCA
ICGC
PLTPLWT
DEG_SCF_FBW7_1
0.75
p.Y551S
DO227681
SKCA
ICGC
PLTPLWT
DEG_SCF_FBW7_1
0.75
p.H550L
DO37547
SKCM
ICGC
PLTPLWT
DEG_SCF_FBW7_1
0.7313
p.G537R
DO37936
SKCM
ICGC
PLTPLWT
DEG_SCF_FBW7_1
0.1389
p.P534L
SIDM00117
Non-Small Cell Lung Carcinoma
GDSC
PLTPLWT
DEG_SCF_FBW7_1
0.0556
p.P534L
ACH-000837
Lung Cancer
CCLE
PLTPLWT
DEG_SCF_FBW7_1
0.0556
p.P534L
NCI-H322M
lung
COSMIC
PLTPLWT
DEG_SCF_FBW7_1
0.0556
p.P547A
SIDM00934
Pancreatic Carcinoma
GDSC
PLTPLWT
DEG_SCF_FBW7_1
0.7503
p.P547A
ACH-000354
Pancreatic Cancer
CCLE
PLTPLWT
DEG_SCF_FBW7_1
0.7503
p.P547A
CAPAN-1
pancreas
COSMIC
PLTPLWT
DEG_SCF_FBW7_1
0.7503
p.P534S
SIDM00527
Colorectal Carcinoma
GDSC
PLTPLWT
DEG_SCF_FBW7_1
0.0556
p.P534S
ACH-000935
Colon/Colorectal Cancer
CCLE
PLTPLWT
DEG_SCF_FBW7_1
0.0556
p.P534S
MDST8
large_intestine
COSMIC
PLTPLWT
DEG_SCF_FBW7_1
0.0556
p.H535N
ACH-000548
Head and Neck Cancer
CCLE
PLTPLWT
DEG_SCF_FBW7_1
0.0833
p.H535N
BHY
upper_aerodigestive_tract
COSMIC
PLTPLWT
DEG_SCF_FBW7_1
0.0833
Drug responses associated with NYAP1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PLTPLWT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6ZVC0
Neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter 1
DEG_SCF_FBW7_1
544:550
PLTPLWT
FBXW7
0.8496
More...