DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PLTPPLS
Uniprot ID:
Q9HD90
Source protein:
Neurogenic differentiation factor 4
Source gene:
NEUROD4
Class:
DEG_SCF_FBW7_1
Location:
252:258
E3 ligase:
FBXW7
DEGRON score:
0.9662
ASA_SCORE:
58.5571
COIL:
0.8387
CONS_SCORE:
0.4434
DSS_SCORE:
0.5368
HELIX:
0.0236
FCONS_SCORE:
1.0533
RIG_SCORE:
0.6829
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D268Y
TCGA-AX-A0J0
UCEC
TCGA
PLTPPLS
DEG_SCF_FBW7_1
0.0556
p.D268Y
DO41133
UCEC
ICGC
PLTPPLS
DEG_SCF_FBW7_1
0.0556
p.P255S
TCGA-BS-A0TA
UCEC
TCGA
PLTPPLS
DEG_SCF_FBW7_1
0.6752
p.P255S
DO43298
UCEC
ICGC
PLTPPLS
DEG_SCF_FBW7_1
0.6752
p.S260N
TCGA-D1-A17D
UCEC
TCGA
PLTPPLS
DEG_SCF_FBW7_1
0.2778
p.S260N
DO41746
UCEC
ICGC
PLTPPLS
DEG_SCF_FBW7_1
0.2778
p.S260N
SIDM00976
Melanoma
GDSC
PLTPPLS
DEG_SCF_FBW7_1
0.2778
p.S260N
ACH-002205
Skin Cancer
CCLE
PLTPPLS
DEG_SCF_FBW7_1
0.2778
p.S260N
WM1552C
skin
COSMIC
PLTPPLS
DEG_SCF_FBW7_1
0.2778
p.S245N
TCGA-EE-A180
SKCM
TCGA
PLTPPLS
DEG_SCF_FBW7_1
0.1389
p.S245N
DO47537
SKCM
ICGC
PLTPPLS
DEG_SCF_FBW7_1
0.1389
p.S245N
SIDM00606
Squamous Cell Lung Carcinoma
GDSC
PLTPPLS
DEG_SCF_FBW7_1
0.1389
p.S245N
SIDM01257
Hepatocellular Carcinoma
GDSC
PLTPPLS
DEG_SCF_FBW7_1
0.1389
p.S245N
SIDM00062
Hepatocellular Carcinoma
GDSC
PLTPPLS
DEG_SCF_FBW7_1
0.1389
p.S245N
ACH-000671
Liver Cancer
CCLE
PLTPPLS
DEG_SCF_FBW7_1
0.1389
p.S245N
ACH-000858
Lung Cancer
CCLE
PLTPPLS
DEG_SCF_FBW7_1
0.1389
p.S245N
ACH-002395
Liver Cancer
CCLE
PLTPPLS
DEG_SCF_FBW7_1
0.1389
p.S245N
HUH-6-clone5
liver
COSMIC
PLTPPLS
DEG_SCF_FBW7_1
0.1389
p.S245N
KNS-62
lung
COSMIC
PLTPPLS
DEG_SCF_FBW7_1
0.1389
p.G251S
TCGA-EE-A3AA
SKCM
TCGA
PLTPPLS
DEG_SCF_FBW7_1
0.3056
p.G251S
DO222632
MELA
ICGC
PLTPPLS
DEG_SCF_FBW7_1
0.3056
p.G251S
DO37571
SKCM
ICGC
PLTPPLS
DEG_SCF_FBW7_1
0.3056
p.C244Y
TCGA-EY-A215
UCEC
TCGA
PLTPPLS
DEG_SCF_FBW7_1
0.1111
p.C244Y
DO42665
UCEC
ICGC
PLTPPLS
DEG_SCF_FBW7_1
0.1111
p.F263V
TCGA-L5-A88V
ESCA
TCGA
PLTPPLS
DEG_SCF_FBW7_1
0.1944
p.Q267H
DO233906
GACA
ICGC
PLTPPLS
DEG_SCF_FBW7_1
0.0833
p.L265F
DO229032
LICA
ICGC
PLTPPLS
DEG_SCF_FBW7_1
0.1389
p.S260I
DO229038
LICA
ICGC
PLTPPLS
DEG_SCF_FBW7_1
0.2778
p.T246A
DO50796
LIRI
ICGC
PLTPPLS
DEG_SCF_FBW7_1
0.1667
p.Y249C
SIDM01573
Plasma Cell Myeloma
GDSC
PLTPPLS
DEG_SCF_FBW7_1
0.25
p.Y249C
ACH-000576
Myeloma
CCLE
PLTPPLS
DEG_SCF_FBW7_1
0.25
Drug responses associated with NEUROD4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PLTPPLS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9HD90
Neurogenic differentiation factor 4
DEG_SCF_FBW7_1
252:258
PLTPPLS
FBXW7
0.9662
More...