DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PLTPRPS
Uniprot ID:
Q00975
Source protein:
Voltage-dependent N-type calcium channel subunit alpha-1B
Source gene:
CACNA1B
Class:
DEG_SCF_FBW7_1
Location:
2194:2200
E3 ligase:
FBXW7
DEGRON score:
0.9912
ASA_SCORE:
79.6286
COIL:
0.9029
CONS_SCORE:
0.3085
DSS_SCORE:
0.7144
HELIX:
0.0623
FCONS_SCORE:
1.0632
RIG_SCORE:
0.6784
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R2184H
TCGA-2J-AABI
PAAD
TCGA
PLTPRPS
DEG_SCF_FBW7_1
0.0556
p.R2198S
TCGA-95-7043
LUAD
TCGA
PLTPRPS
DEG_SCF_FBW7_1
0.6316
p.R2198S
TCGA-FS-A1ZH
SKCM
TCGA
PLTPRPS
DEG_SCF_FBW7_1
0.6316
p.R2198S
TCGA-H2-A26U
THCA
TCGA
PLTPRPS
DEG_SCF_FBW7_1
0.6316
p.R2198H
TCGA-AX-A2HG
UCEC
TCGA
PLTPRPS
DEG_SCF_FBW7_1
0.7133
p.R2198H
TCGA-B5-A11E
UCEC
TCGA
PLTPRPS
DEG_SCF_FBW7_1
0.7133
p.R2198H
TCGA-D5-6927
COAD
TCGA
PLTPRPS
DEG_SCF_FBW7_1
0.7133
p.R2198H
SIDM01274
Esophageal Carcinoma
GDSC
PLTPRPS
DEG_SCF_FBW7_1
0.7133
p.R2198H
SIDM01943
Colorectal Carcinoma
GDSC
PLTPRPS
DEG_SCF_FBW7_1
0.7133
p.P2194S
TCGA-B5-A11E
UCEC
TCGA
PLTPRPS
DEG_SCF_FBW7_1
0.6752
p.G2185S
TCGA-D1-A168
UCEC
TCGA
PLTPRPS
DEG_SCF_FBW7_1
0.0833
p.G2185S
TCGA-HU-A4GX
STAD
TCGA
PLTPRPS
DEG_SCF_FBW7_1
0.0833
p.R2188K
TCGA-ER-A19O
SKCM
TCGA
PLTPRPS
DEG_SCF_FBW7_1
0.1667
p.T2193K
TCGA-G2-AA3F
BLCA
TCGA
PLTPRPS
DEG_SCF_FBW7_1
0.3056
p.P2197L
TCGA-RD-A7C1
STAD
TCGA
PLTPRPS
DEG_SCF_FBW7_1
0.7582
p.T2191K
DO51885
BLCA
ICGC
PLTPRPS
DEG_SCF_FBW7_1
0.25
p.R2196H
DO10332
COAD
ICGC
PLTPRPS
DEG_SCF_FBW7_1
0.8244
p.R2196H
DO33432
PACA
ICGC
PLTPRPS
DEG_SCF_FBW7_1
0.8244
p.R2196H
DO41644
UCEC
ICGC
PLTPRPS
DEG_SCF_FBW7_1
0.8244
p.R2196H
DO41337
UCEC
ICGC
PLTPRPS
DEG_SCF_FBW7_1
0.8244
p.T2209M
DO222866
COCA
ICGC
PLTPRPS
DEG_SCF_FBW7_1
0.0833
p.R2185Q
DO233888
GACA
ICGC
PLTPRPS
DEG_SCF_FBW7_1
0.0833
p.R2196S
DO24739
LUAD
ICGC
PLTPRPS
DEG_SCF_FBW7_1
0.7427
p.R2196S
DO37575
SKCM
ICGC
PLTPRPS
DEG_SCF_FBW7_1
0.7427
p.R2196S
DO40045
THCA
ICGC
PLTPRPS
DEG_SCF_FBW7_1
0.7427
p.R2186K
DO38063
SKCM
ICGC
PLTPRPS
DEG_SCF_FBW7_1
0.1111
p.P2195L
DO50132
STAD
ICGC
PLTPRPS
DEG_SCF_FBW7_1
0.7582
p.P2192S
DO41644
UCEC
ICGC
PLTPRPS
DEG_SCF_FBW7_1
0.2778
p.G2199D
DO42793
UCEC
ICGC
PLTPRPS
DEG_SCF_FBW7_1
0.7198
p.I2209T
DO42665
UCEC
ICGC
PLTPRPS
DEG_SCF_FBW7_1
0.0833
p.S2184T
YAPC
pancreas
COSMIC
PLTPRPS
DEG_SCF_FBW7_1
0.0556
p.S2184T
TALL-1
haematopoietic_and_lymphoid_tissue
COSMIC
PLTPRPS
DEG_SCF_FBW7_1
0.0556
p.S2184T
SCC-3
haematopoietic_and_lymphoid_tissue
COSMIC
PLTPRPS
DEG_SCF_FBW7_1
0.0556
p.S2184T
AMO-1
haematopoietic_and_lymphoid_tissue
COSMIC
PLTPRPS
DEG_SCF_FBW7_1
0.0556
p.L2194M
NCI-H2342
lung
COSMIC
PLTPRPS
DEG_SCF_FBW7_1
0.711
Drug responses associated with CACNA1B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PLTPRPS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q00975
Voltage-dependent N-type calcium channel subunit alpha-1B
DEG_SCF_FBW7_1
2194:2200
PLTPRPS
FBXW7
0.9912
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