DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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Degron:
PLTPSLS
Uniprot ID:
A6NC98
Source protein:
Coiled-coil domain-containing protein 88B
Source gene:
CCDC88B
Class:
DEG_SCF_FBW7_1
Location:
1469:1475
E3 ligase:
FBXW7
DEGRON score:
0.9591
ASA_SCORE:
90.7429
COIL:
0.7893
CONS_SCORE:
0.319
DSS_SCORE:
0.9596
HELIX:
0.1926
FCONS_SCORE:
0.9868
RIG_SCORE:
0.6377
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R1468G
SIDM00855
Other Sarcomas
GDSC
PLTPSLS
DEG_SCF_FBW7_1
0.3056
p.R1468G
SIDM00052
Esophageal Squamous Cell Carcinoma
GDSC
PLTPSLS
DEG_SCF_FBW7_1
0.3056
p.R1468G
SIDM00032
Bladder Carcinoma
GDSC
PLTPSLS
DEG_SCF_FBW7_1
0.3056
p.E1466D
SIDM00193
Colorectal Carcinoma
GDSC
PLTPSLS
DEG_SCF_FBW7_1
0.25
p.E1466D
ACH-000991
Colon/Colorectal Cancer
CCLE
PLTPSLS
DEG_SCF_FBW7_1
0.25
p.E1466D
SNU-81
large_intestine
COSMIC
PLTPSLS
DEG_SCF_FBW7_1
0.25
p.L1474H
SIDM01124
Non-Small Cell Lung Carcinoma
GDSC
PLTPSLS
DEG_SCF_FBW7_1
0.6202
p.L1474H
ACH-000945
Lung Cancer
CCLE
PLTPSLS
DEG_SCF_FBW7_1
0.6202
p.L1474H
NCI-H650
lung
COSMIC
PLTPSLS
DEG_SCF_FBW7_1
0.6202
Drug responses associated with CCDC88B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PLTPSLS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A6NC98
Coiled-coil domain-containing protein 88B
DEG_SCF_FBW7_1
1469:1475
PLTPSLS
FBXW7
0.9591
More...