DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PLTPSQS
Uniprot ID:
Q96MM6
Source protein:
Heat shock 70 kDa protein 12B
Source gene:
HSPA12B
Class:
DEG_SCF_FBW7_1
Location:
40:46
E3 ligase:
FBXW7
DEGRON score:
0.998
ASA_SCORE:
84.3286
COIL:
0.9269
CONS_SCORE:
0.5666
DSS_SCORE:
0.6716
HELIX:
0.0337
FCONS_SCORE:
1.0309
RIG_SCORE:
0.6213
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G37S
TCGA-2W-A8YY
CESC
TCGA
PLTPSQS
DEG_SCF_FBW7_1
0.25
p.G37S
DO223732
CESC
ICGC
PLTPSQS
DEG_SCF_FBW7_1
0.25
p.R52Q
TCGA-AA-3980
COAD
TCGA
PLTPSQS
DEG_SCF_FBW7_1
0.1667
p.R52Q
DO8455
COAD
ICGC
PLTPSQS
DEG_SCF_FBW7_1
0.1667
p.T32I
TCGA-DA-A1IC
SKCM
TCGA
PLTPSQS
DEG_SCF_FBW7_1
0.1111
p.T32I
DO37430
SKCM
ICGC
PLTPSQS
DEG_SCF_FBW7_1
0.1111
p.S44L
TCGA-E6-A1LX
UCEC
TCGA
PLTPSQS
DEG_SCF_FBW7_1
0.7667
p.S44L
DO41020
UCEC
ICGC
PLTPSQS
DEG_SCF_FBW7_1
0.7667
p.E50K
TCGA-EE-A2MR
SKCM
TCGA
PLTPSQS
DEG_SCF_FBW7_1
0.2222
p.E50K
DO37819
SKCM
ICGC
PLTPSQS
DEG_SCF_FBW7_1
0.2222
p.R52L
TCGA-ER-A2NH
SKCM
TCGA
PLTPSQS
DEG_SCF_FBW7_1
0.1667
p.R52L
DO47683
SKCM
ICGC
PLTPSQS
DEG_SCF_FBW7_1
0.1667
p.L41I
TCGA-EY-A215
UCEC
TCGA
PLTPSQS
DEG_SCF_FBW7_1
0.6063
p.L41I
DO42665
UCEC
ICGC
PLTPSQS
DEG_SCF_FBW7_1
0.6063
p.P54L
DO222753
MELA
ICGC
PLTPSQS
DEG_SCF_FBW7_1
0.1111
Drug responses associated with HSPA12B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PLTPSQS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96MM6
Heat shock 70 kDa protein 12B
DEG_SCF_FBW7_1
40:46
PLTPSQS
FBXW7
0.998
More...