DegronMD: protein-targeted degradation, mutation and drug response to degrons
Home
(current)
Browse
Proteins/Degrons
Mutations
Drug response
Network-rewiring
Drug resistance
Search
Tutorial
Download
Contact
Links
BSML
CPH
CGC
Degron:
PMTPRRT
Uniprot ID:
Q92620
Source protein:
Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
Source gene:
DHX38
Class:
DEG_SCF_FBW7_1
Location:
1215:1221
E3 ligase:
FBXW7
DEGRON score:
0.9136
ASA_SCORE:
100.1714
COIL:
0.9057
CONS_SCORE:
0.3031
DSS_SCORE:
0.8277
HELIX:
0.0243
FCONS_SCORE:
0.9949
RIG_SCORE:
0.6812
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R1209L
TCGA-BF-A1Q0
SKCM
TCGA
PMTPRRT
DEG_SCF_FBW7_1
0.1667
p.P1207L
TCGA-FW-A3R5
SKCM
TCGA
PMTPRRT
DEG_SCF_FBW7_1
0.1111
p.R1224H
SIDM00755
Non-Small Cell Lung Carcinoma
GDSC
PMTPRRT
DEG_SCF_FBW7_1
0.25
p.R1224H
ACH-000888
Lung Cancer
CCLE
PMTPRRT
DEG_SCF_FBW7_1
0.25
p.R1224H
NCI-H1793
lung
COSMIC
PMTPRRT
DEG_SCF_FBW7_1
0.25
Drug responses associated with DHX38 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PMTPRRT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q92620
Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
DEG_SCF_FBW7_1
1215:1221
PMTPRRT
FBXW7
0.9136
More...