DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PNTPAWE
Uniprot ID:
P12830
Source protein:
Cadherin-1
Source gene:
CDH1
Class:
DEG_SCF_FBW7_2
Location:
404:410
E3 ligase:
FBXW7
DEGRON score:
0.9053
ASA_SCORE:
62.3143
COIL:
0.7346
CONS_SCORE:
0.4098
DSS_SCORE:
0.3137
HELIX:
0.0839
FCONS_SCORE:
0.709
RIG_SCORE:
0.8115
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A408P
TCGA-55-A4DF
LUAD
TCGA
PNTPAWE
DEG_SCF_FBW7_2
0.6392
p.A408P
DO45318
LUAD
ICGC
PNTPAWE
DEG_SCF_FBW7_2
0.6392
p.A403T
TCGA-A5-A0GA
UCEC
TCGA
PNTPAWE
DEG_SCF_FBW7_2
0.3056
p.A403T
DO43763
UCEC
ICGC
PNTPAWE
DEG_SCF_FBW7_2
0.3056
p.D400V
TCGA-CD-5799
STAD
TCGA
PNTPAWE
DEG_SCF_FBW7_2
0.2222
p.D400V
DO233758
GACA
ICGC
PNTPAWE
DEG_SCF_FBW7_2
0.2222
p.D400V
DO38775
STAD
ICGC
PNTPAWE
DEG_SCF_FBW7_2
0.2222
p.D402H
TCGA-D7-8572
STAD
TCGA
PNTPAWE
DEG_SCF_FBW7_2
0.2778
p.D402H
TCGA-E9-A2JT
BRCA
TCGA
PNTPAWE
DEG_SCF_FBW7_2
0.2778
p.D402H
DO3964
BRCA
ICGC
PNTPAWE
DEG_SCF_FBW7_2
0.2778
p.D402H
DO233615
GACA
ICGC
PNTPAWE
DEG_SCF_FBW7_2
0.2778
p.D402H
DO47735
STAD
ICGC
PNTPAWE
DEG_SCF_FBW7_2
0.2778
p.D402H
SIDM02040
Esophageal Carcinoma
GDSC
PNTPAWE
DEG_SCF_FBW7_2
0.2778
p.W409L
TCGA-GI-A2C8
BRCA
TCGA
PNTPAWE
DEG_SCF_FBW7_2
0.5904
p.W409L
DO5992
BRCA
ICGC
PNTPAWE
DEG_SCF_FBW7_2
0.5904
p.D400N
DO224732
BRCA
ICGC
PNTPAWE
DEG_SCF_FBW7_2
0.2222
p.N397K
DO233671
GACA
ICGC
PNTPAWE
DEG_SCF_FBW7_2
0.25
p.T414A
DO233885
GACA
ICGC
PNTPAWE
DEG_SCF_FBW7_2
0.2222
p.V399L
DO26052
LUAD
ICGC
PNTPAWE
DEG_SCF_FBW7_2
0.1944
p.D400G
DO35442
PACA
ICGC
PNTPAWE
DEG_SCF_FBW7_2
0.2222
p.S404F
DO232224
PBCA
ICGC
PNTPAWE
DEG_SCF_FBW7_2
0.7982
p.V414M
DO36397
READ
ICGC
PNTPAWE
DEG_SCF_FBW7_2
0.2222
p.P400S
DO47282
SKCM
ICGC
PNTPAWE
DEG_SCF_FBW7_2
0.2222
p.D402N
SIDM00938
Breast Carcinoma
GDSC
PNTPAWE
DEG_SCF_FBW7_2
0.2778
p.D402N
ACH-000902
Breast Cancer
CCLE
PNTPAWE
DEG_SCF_FBW7_2
0.2778
p.D402N
CAL-148
breast
COSMIC
PNTPAWE
DEG_SCF_FBW7_2
0.2778
p.E410K
SIDM00419
Ewing's Sarcoma
GDSC
PNTPAWE
DEG_SCF_FBW7_2
0.7022
p.E410K
TC-71
bone
COSMIC
PNTPAWE
DEG_SCF_FBW7_2
0.7022
p.I415T
SIDM00114
Non-Small Cell Lung Carcinoma
GDSC
PNTPAWE
DEG_SCF_FBW7_2
0.1944
p.I415T
H513
pleura
COSMIC
PNTPAWE
DEG_SCF_FBW7_2
0.1944
p.N405S
SIDM01083
Oral Cavity Carcinoma
GDSC
PNTPAWE
DEG_SCF_FBW7_2
0.5958
p.N405S
ACH-000254
Head and Neck Cancer
CCLE
PNTPAWE
DEG_SCF_FBW7_2
0.5958
p.N405S
SCC-15
upper_aerodigestive_tract
COSMIC
PNTPAWE
DEG_SCF_FBW7_2
0.5958
p.T406A
SIDM01608
Endometrial Carcinoma
GDSC
PNTPAWE
DEG_SCF_FBW7_2
0.7139
p.T406A
ACH-000990
Endometrial/Uterine Cancer
CCLE
PNTPAWE
DEG_SCF_FBW7_2
0.7139
p.D400A
SIDM00780
Colorectal Carcinoma
GDSC
PNTPAWE
DEG_SCF_FBW7_2
0.2222
p.D400A
ACH-000967
Colon/Colorectal Cancer
CCLE
PNTPAWE
DEG_SCF_FBW7_2
0.2222
Drug responses associated with CDH1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PNTPAWE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P12830
Cadherin-1
DEG_SCF_FBW7_2
404:410
PNTPAWE
FBXW7
0.9053
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