DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PNTPLPS
Uniprot ID:
Q6NUP7
Source protein:
Serine/threonine-protein phosphatase 4 regulatory subunit 4
Source gene:
PPP4R4
Class:
DEG_SCF_FBW7_1
Location:
834:840
E3 ligase:
FBXW7
DEGRON score:
0.9969
ASA_SCORE:
102.8571
COIL:
0.972
CONS_SCORE:
0.3537
DSS_SCORE:
0.6693
HELIX:
0.0106
FCONS_SCORE:
1.0391
RIG_SCORE:
0.5679
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L838S
TCGA-A2-A0SW
BRCA
TCGA
PNTPLPS
DEG_SCF_FBW7_1
0.6556
p.L838S
DO4491
BRCA
ICGC
PNTPLPS
DEG_SCF_FBW7_1
0.6556
p.S827R
TCGA-AJ-A3BH
UCEC
TCGA
PNTPLPS
DEG_SCF_FBW7_1
0.1389
p.S827R
DO41638
UCEC
ICGC
PNTPLPS
DEG_SCF_FBW7_1
0.1389
p.S831F
TCGA-BF-A1Q0
SKCM
TCGA
PNTPLPS
DEG_SCF_FBW7_1
0.25
p.S831F
DO47374
SKCM
ICGC
PNTPLPS
DEG_SCF_FBW7_1
0.25
p.T836A
TCGA-BH-A1FU
BRCA
TCGA
PNTPLPS
DEG_SCF_FBW7_1
0.7139
p.T836A
DO6128
BRCA
ICGC
PNTPLPS
DEG_SCF_FBW7_1
0.7139
p.P829L
TCGA-C5-A1ML
CESC
TCGA
PNTPLPS
DEG_SCF_FBW7_1
0.1944
p.P829L
DO51592
CESC
ICGC
PNTPLPS
DEG_SCF_FBW7_1
0.1944
p.R843H
TCGA-DA-A95X
SKCM
TCGA
PNTPLPS
DEG_SCF_FBW7_1
0.25
p.R843H
TCGA-VQ-A8PP
STAD
TCGA
PNTPLPS
DEG_SCF_FBW7_1
0.25
p.R843H
DO229130
NKTL
ICGC
PNTPLPS
DEG_SCF_FBW7_1
0.25
p.R843H
DO219480
SKCM
ICGC
PNTPLPS
DEG_SCF_FBW7_1
0.25
p.R843H
DO51774
STAD
ICGC
PNTPLPS
DEG_SCF_FBW7_1
0.25
p.P834H
TCGA-EO-A3B0
UCEC
TCGA
PNTPLPS
DEG_SCF_FBW7_1
0.7694
p.P834H
DO219773
UCEC
ICGC
PNTPLPS
DEG_SCF_FBW7_1
0.7694
p.S842F
TCGA-EU-5904
KIRC
TCGA
PNTPLPS
DEG_SCF_FBW7_1
0.2778
p.S842F
TCGA-FW-A5DX
SKCM
TCGA
PNTPLPS
DEG_SCF_FBW7_1
0.2778
p.S842F
DO223033
ESCA
ICGC
PNTPLPS
DEG_SCF_FBW7_1
0.2778
p.S842F
DO17482
KIRC
ICGC
PNTPLPS
DEG_SCF_FBW7_1
0.2778
p.S842F
DO47253
SKCM
ICGC
PNTPLPS
DEG_SCF_FBW7_1
0.2778
p.P839L
SIDM00529
Breast Carcinoma
GDSC
PNTPLPS
DEG_SCF_FBW7_1
0.6471
Drug responses associated with PPP4R4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PNTPLPS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6NUP7
Serine/threonine-protein phosphatase 4 regulatory subunit 4
DEG_SCF_FBW7_1
834:840
PNTPLPS
FBXW7
0.9969
More...