DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PPAAAVSPM
Uniprot ID:
Q69YQ0
Source protein:
Cytospin-A
Source gene:
SPECC1L
Class:
DEG_SIAH_1
Location:
875:883
E3 ligase:
SIAH1,SIAH2,SIAH3
DEGRON score:
0.9979
ASA_SCORE:
65.5444
COIL:
0.7197
CONS_SCORE:
0.5192
DSS_SCORE:
0.6603
HELIX:
0.2163
FCONS_SCORE:
1.1219
RIG_SCORE:
0.6228
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T874I
TCGA-IZ-8196
KIRP
TCGA
PPAAAVSPM
DEG_SIAH_1
0.75
p.T874I
DO44461
KIRP
ICGC
PPAAAVSPM
DEG_SIAH_1
0.75
p.S889N
DO230326
COCA
ICGC
PPAAAVSPM
DEG_SIAH_1
0.6111
p.P869L
SIDM00014
Colorectal Carcinoma
GDSC
PPAAAVSPM
DEG_SIAH_1
0.1667
p.P869L
LIM1215
large_intestine
COSMIC
PPAAAVSPM
DEG_SIAH_1
0.1667
Drug responses associated with SPECC1L mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PPAAAVSPM
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q69YQ0
Cytospin-A
DEG_SIAH_1
875:883
PPAAAVSPM
SIAH1,SIAH2,SIAH3
0.9979
More...