DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PPATPPGS
Uniprot ID:
Q99640
Source protein:
Membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase
Source gene:
PKMYT1
Class:
DEG_SCF_FBW7_1
Location:
409:416
E3 ligase:
FBXW7
DEGRON score:
0.9847
ASA_SCORE:
79.375
COIL:
0.971
CONS_SCORE:
0.4448
DSS_SCORE:
0.4649
HELIX:
0.0116
FCONS_SCORE:
1.1435
RIG_SCORE:
0.5852
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P413Q
TCGA-CN-5374
HNSC
TCGA
PPATPPGS
DEG_SCF_FBW7_1
0.7035
p.W403G
TCGA-D7-A6EY
STAD
TCGA
PPATPPGS
DEG_SCF_FBW7_1
0.1667
p.P417L
TCGA-L5-A8NE
ESCA
TCGA
PPATPPGS
DEG_SCF_FBW7_1
0.3056
p.S416N
DO222501
COCA
ICGC
PPATPPGS
DEG_SCF_FBW7_1
0.818
p.P404Q
DO15430
HNSC
ICGC
PPATPPGS
DEG_SCF_FBW7_1
0.1944
p.P404Q
DO25847
LUAD
ICGC
PPATPPGS
DEG_SCF_FBW7_1
0.1944
p.L418F
DO22237
LGG
ICGC
PPATPPGS
DEG_SCF_FBW7_1
0.2778
p.G406A
DO25847
LUAD
ICGC
PPATPPGS
DEG_SCF_FBW7_1
0.25
p.L418I
DO42713
UCEC
ICGC
PPATPPGS
DEG_SCF_FBW7_1
0.2778
p.P417R
SIDM00203
Ewing's Sarcoma
GDSC
PPATPPGS
DEG_SCF_FBW7_1
0.3056
p.P417R
ACH-002111
Bone Cancer
CCLE
PPATPPGS
DEG_SCF_FBW7_1
0.3056
p.G408D
SIDM00018
Acute Myeloid Leukemia
GDSC
PPATPPGS
DEG_SCF_FBW7_1
0.3056
p.G408D
ACH-000498
Leukemia
CCLE
PPATPPGS
DEG_SCF_FBW7_1
0.3056
p.G408D
KO52
haematopoietic_and_lymphoid_tissue
COSMIC
PPATPPGS
DEG_SCF_FBW7_1
0.3056
p.D423E
JHOS-4
ovary
COSMIC
PPATPPGS
DEG_SCF_FBW7_1
0.1389
p.R417W
NB1
autonomic_ganglia
COSMIC
PPATPPGS
DEG_SCF_FBW7_1
0.3056
p.G399D
KO52
haematopoietic_and_lymphoid_tissue
COSMIC
PPATPPGS
DEG_SCF_FBW7_1
0.0556
p.R408W
BT-474
breast
COSMIC
PPATPPGS
DEG_SCF_FBW7_1
0.3056
Drug responses associated with PKMYT1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PPATPPGS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q99640
Membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase
DEG_SCF_FBW7_1
409:416
PPATPPGS
FBXW7
0.9847
More...