DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PPCTPGSE
Uniprot ID:
Q9BYV6
Source protein:
Tripartite motif-containing protein 55
Source gene:
TRIM55
Class:
DEG_SCF_FBW7_2
Location:
457:464
E3 ligase:
FBXW7
DEGRON score:
0.9146
ASA_SCORE:
82.8
COIL:
0.923
CONS_SCORE:
0.2928
DSS_SCORE:
0.6781
HELIX:
0.0294
FCONS_SCORE:
0.9075
RIG_SCORE:
0.6412
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P458L
TCGA-95-7562
LUAD
TCGA
PPCTPGSE
DEG_SCF_FBW7_2
0.6471
p.P458L
DO51196
LUAD
ICGC
PPCTPGSE
DEG_SCF_FBW7_2
0.6471
p.P461T
TCGA-AA-3864
COAD
TCGA
PPCTPGSE
DEG_SCF_FBW7_2
0.7031
p.P461T
DO8490
COAD
ICGC
PPCTPGSE
DEG_SCF_FBW7_2
0.7031
p.R451Q
TCGA-AA-3875
COAD
TCGA
PPCTPGSE
DEG_SCF_FBW7_2
0.1667
p.R451Q
DO222830
BTCA
ICGC
PPCTPGSE
DEG_SCF_FBW7_2
0.1667
p.R451Q
DO9282
COAD
ICGC
PPCTPGSE
DEG_SCF_FBW7_2
0.1667
p.G467R
TCGA-BF-A1PX
SKCM
TCGA
PPCTPGSE
DEG_SCF_FBW7_2
0.25
p.G467R
DO51236
SKCM
ICGC
PPCTPGSE
DEG_SCF_FBW7_2
0.25
p.S463G
TCGA-BS-A0UF
UCEC
TCGA
PPCTPGSE
DEG_SCF_FBW7_2
0.5882
p.S463G
DO41488
UCEC
ICGC
PPCTPGSE
DEG_SCF_FBW7_2
0.5882
p.G448S
TCGA-EE-A3AC
SKCM
TCGA
PPCTPGSE
DEG_SCF_FBW7_2
0.0833
p.G448S
DO37631
SKCM
ICGC
PPCTPGSE
DEG_SCF_FBW7_2
0.0833
p.G448D
TCGA-ER-A2NG
SKCM
TCGA
PPCTPGSE
DEG_SCF_FBW7_2
0.0833
p.G448D
DO47552
SKCM
ICGC
PPCTPGSE
DEG_SCF_FBW7_2
0.0833
p.G465C
TCGA-FW-A3R5
SKCM
TCGA
PPCTPGSE
DEG_SCF_FBW7_2
0.3056
p.G465C
DO37406
SKCM
ICGC
PPCTPGSE
DEG_SCF_FBW7_2
0.3056
p.E464K
DO228483
BRCA
ICGC
PPCTPGSE
DEG_SCF_FBW7_2
0.7022
p.R451W
DO227657
COCA
ICGC
PPCTPGSE
DEG_SCF_FBW7_2
0.1667
p.S463N
DO234370
ESAD
ICGC
PPCTPGSE
DEG_SCF_FBW7_2
0.5958
p.P461Q
DO223145
ESCA
ICGC
PPCTPGSE
DEG_SCF_FBW7_2
0.7035
p.Q468L
SIDM00312
Plasma Cell Myeloma
GDSC
PPCTPGSE
DEG_SCF_FBW7_2
0.2222
p.Q468L
ACH-000183
Myeloma
CCLE
PPCTPGSE
DEG_SCF_FBW7_2
0.2222
p.Q468L
L-363
haematopoietic_and_lymphoid_tissue
COSMIC
PPCTPGSE
DEG_SCF_FBW7_2
0.2222
p.S449Y
L-1236
haematopoietic_and_lymphoid_tissue
COSMIC
PPCTPGSE
DEG_SCF_FBW7_2
0.1111
Drug responses associated with TRIM55 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PPCTPGSE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9BYV6
Tripartite motif-containing protein 55
DEG_SCF_FBW7_2
457:464
PPCTPGSE
FBXW7
0.9146
More...