DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PPHTPVRT
Uniprot ID:
P06400
Source protein:
Retinoblastoma-associated protein
Source gene:
RB1
Class:
DEG_SCF_FBW7_1
Location:
370:377
E3 ligase:
FBXW7
DEGRON score:
0.9995
ASA_SCORE:
81.85
COIL:
0.8123
CONS_SCORE:
0.4927
DSS_SCORE:
0.4447
HELIX:
0.1454
FCONS_SCORE:
1.2616
RIG_SCORE:
0.7612
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q384H
TCGA-AJ-A3EL
UCEC
TCGA
PPHTPVRT
DEG_SCF_FBW7_1
0.1389
p.Q384H
DO41542
UCEC
ICGC
PPHTPVRT
DEG_SCF_FBW7_1
0.1389
p.L385S
TCGA-AX-A1CE
UCEC
TCGA
PPHTPVRT
DEG_SCF_FBW7_1
0.1111
p.L385S
DO42280
UCEC
ICGC
PPHTPVRT
DEG_SCF_FBW7_1
0.1111
p.M379L
TCGA-BR-4361
STAD
TCGA
PPHTPVRT
DEG_SCF_FBW7_1
0.2778
p.M379L
DO38887
STAD
ICGC
PPHTPVRT
DEG_SCF_FBW7_1
0.2778
p.E365Q
TCGA-IN-A6RO
STAD
TCGA
PPHTPVRT
DEG_SCF_FBW7_1
0.1944
p.E365Q
DO51740
STAD
ICGC
PPHTPVRT
DEG_SCF_FBW7_1
0.1944
p.M387I
TCGA-KQ-A41N
BLCA
TCGA
PPHTPVRT
DEG_SCF_FBW7_1
0.0556
p.M387I
DO223588
BLCA
ICGC
PPHTPVRT
DEG_SCF_FBW7_1
0.0556
p.P374A
TCGA-Q1-A73O
CESC
TCGA
PPHTPVRT
DEG_SCF_FBW7_1
0.7503
p.P374A
DO51612
CESC
ICGC
PPHTPVRT
DEG_SCF_FBW7_1
0.7503
p.L385F
DO228815
LICA
ICGC
PPHTPVRT
DEG_SCF_FBW7_1
0.1111
p.M379T
ACH-001669
Leukemia
CCLE
PPHTPVRT
DEG_SCF_FBW7_1
0.2778
Drug responses associated with RB1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PPHTPVRT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P06400
Retinoblastoma-associated protein
DEG_SCF_FBW7_1
370:377
PPHTPVRT
FBXW7
0.9995
More...