DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PPMIV
Uniprot ID:
Q15459
Source protein:
Splicing factor 3A subunit 1
Source gene:
SF3A1
Class:
DEG_Kelch_actinfilin_1
Location:
644:648
E3 ligase:
CUL3,KLHL17
DEGRON score:
0.7778
ASA_SCORE:
87
COIL:
0.92
CONS_SCORE:
0.2744
DSS_SCORE:
0.2971
HELIX:
0.0162
FCONS_SCORE:
0.9029
RIG_SCORE:
0.6448
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.M646L
DO229167
THCA
ICGC
PPMIV
DEG_Kelch_actinfilin_1
0.711
p.P644T
DO229022
LICA
ICGC
PPMIV
DEG_Kelch_actinfilin_1
0.7031
p.P649T
ACH-002059
Leukemia
CCLE
PPMIV
DEG_Kelch_actinfilin_1
0.3056
p.R642P
DO229163
THCA
ICGC
PPMIV
DEG_Kelch_actinfilin_1
0.2778
p.P636T
TCGA-EB-A24C
SKCM
TCGA
PPMIV
DEG_Kelch_actinfilin_1
0.1111
p.P636T
DO37438
SKCM
ICGC
PPMIV
DEG_Kelch_actinfilin_1
0.1111
p.A635V
TCGA-AA-3663
COAD
TCGA
PPMIV
DEG_Kelch_actinfilin_1
0.0833
p.A635V
DO9346
COAD
ICGC
PPMIV
DEG_Kelch_actinfilin_1
0.0833
p.P657L
TCGA-W3-AA21
SKCM
TCGA
PPMIV
DEG_Kelch_actinfilin_1
0.0833
p.P657L
DO51278
SKCM
ICGC
PPMIV
DEG_Kelch_actinfilin_1
0.0833
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Drug responses associated with SF3A1 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
No data available in table
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All proteins holding degron of PPMIV
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q15459
Splicing factor 3A subunit 1
DEG_Kelch_actinfilin_1
644:648
PPMIV
CUL3,KLHL17
0.7778
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