DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PPRALVLPH
Uniprot ID:
Q86TG7
Source protein:
Retrotransposon-derived protein PEG10
Source gene:
PEG10
Class:
DEG_SIAH_1
Location:
253:261
E3 ligase:
SIAH1,SIAH2,SIAH3
DEGRON score:
0.9984
ASA_SCORE:
104.3
COIL:
0.9419
CONS_SCORE:
0.7705
DSS_SCORE:
0.6011
HELIX:
0.0373
FCONS_SCORE:
1.0921
RIG_SCORE:
0.6548
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P270T
TCGA-66-2763
LUSC
TCGA
PPRALVLPH
DEG_SIAH_1
0.0833
p.P270T
DO27620
LUSC
ICGC
PPRALVLPH
DEG_SIAH_1
0.0833
p.R251H
TCGA-AX-A05S
UCEC
TCGA
PPRALVLPH
DEG_SIAH_1
0.2778
p.R251H
DO233088
GACA
ICGC
PPRALVLPH
DEG_SIAH_1
0.2778
p.R251H
DO50687
ORCA
ICGC
PPRALVLPH
DEG_SIAH_1
0.2778
p.R251H
DO43218
UCEC
ICGC
PPRALVLPH
DEG_SIAH_1
0.2778
p.D269N
TCGA-BS-A0U7
UCEC
TCGA
PPRALVLPH
DEG_SIAH_1
0.1111
p.D269N
DO41482
UCEC
ICGC
PPRALVLPH
DEG_SIAH_1
0.1111
p.R255Q
TCGA-D3-A8GD
SKCM
TCGA
PPRALVLPH
DEG_SIAH_1
0.6218
p.R255Q
DO50282
SKCM
ICGC
PPRALVLPH
DEG_SIAH_1
0.6218
p.R255Q
CW-2
large_intestine
COSMIC
PPRALVLPH
DEG_SIAH_1
0.6218
p.K249N
TCGA-DK-A2I1
BLCA
TCGA
PPRALVLPH
DEG_SIAH_1
0.3333
p.K249N
DO444
BLCA
ICGC
PPRALVLPH
DEG_SIAH_1
0.3333
p.A256V
DO233270
GACA
ICGC
PPRALVLPH
DEG_SIAH_1
0.6936
p.L250M
SIDM00789
Colorectal Carcinoma
GDSC
PPRALVLPH
DEG_SIAH_1
0.25
p.L250M
HCT-15
large_intestine
COSMIC
PPRALVLPH
DEG_SIAH_1
0.25
p.R245L
SIDM00925
Non-Small Cell Lung Carcinoma
GDSC
PPRALVLPH
DEG_SIAH_1
0.1111
p.R245L
NCI-H441
lung
COSMIC
PPRALVLPH
DEG_SIAH_1
0.1111
p.R251C
SIDM01088
Endometrial Carcinoma
GDSC
PPRALVLPH
DEG_SIAH_1
0.2778
p.R251C
ACH-000795
Leukemia
CCLE
PPRALVLPH
DEG_SIAH_1
0.2778
p.R251C
RL95-2
endometrium
COSMIC
PPRALVLPH
DEG_SIAH_1
0.2778
p.R251C
MOLT-13
haematopoietic_and_lymphoid_tissue
COSMIC
PPRALVLPH
DEG_SIAH_1
0.2778
p.N262S
SIDM00794
Other Solid Cancers
GDSC
PPRALVLPH
DEG_SIAH_1
0.3056
p.N262S
A388
skin
COSMIC
PPRALVLPH
DEG_SIAH_1
0.3056
p.P260S
ACH-000909
Endometrial/Uterine Cancer
CCLE
PPRALVLPH
DEG_SIAH_1
0.6752
p.P260S
ACH-000946
Endometrial/Uterine Cancer
CCLE
PPRALVLPH
DEG_SIAH_1
0.6752
p.A246G
ACH-000951
Lung Cancer
CCLE
PPRALVLPH
DEG_SIAH_1
0.1389
p.A246G
NCI-H2342
lung
COSMIC
PPRALVLPH
DEG_SIAH_1
0.1389
p.H266L
ACH-002157
Lung Cancer
CCLE
PPRALVLPH
DEG_SIAH_1
0.1944
p.H266L
LC-2-ad
lung
COSMIC
PPRALVLPH
DEG_SIAH_1
0.1944
p.S260L
NCI-SNU-1
stomach
COSMIC
PPRALVLPH
DEG_SIAH_1
0.7667
Drug responses associated with PEG10 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PPRALVLPH
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q86TG7
Retrotransposon-derived protein PEG10
DEG_SIAH_1
253:261
PPRALVLPH
SIAH1,SIAH2,SIAH3
0.9984
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