DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PPTPAVS
Uniprot ID:
A6NHR9
Source protein:
Structural maintenance of chromosomes flexible hinge domain-containing protein 1
Source gene:
SMCHD1
Class:
DEG_SCF_FBW7_1
Location:
1497:1503
E3 ligase:
FBXW7
DEGRON score:
0.5349
ASA_SCORE:
64.9857
COIL:
0.7244
CONS_SCORE:
0.4014
DSS_SCORE:
0.3871
HELIX:
0.0394
FCONS_SCORE:
0.8506
RIG_SCORE:
0.7146
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L1513F
TCGA-50-5941
LUAD
TCGA
PPTPAVS
DEG_SCF_FBW7_1
0.0556
p.L1513F
DO25528
LUAD
ICGC
PPTPAVS
DEG_SCF_FBW7_1
0.0556
p.V1492A
TCGA-99-7458
LUAD
TCGA
PPTPAVS
DEG_SCF_FBW7_1
0.1944
p.V1492A
DO25416
LUAD
ICGC
PPTPAVS
DEG_SCF_FBW7_1
0.1944
p.N1504Y
TCGA-DD-AACQ
LIHC
TCGA
PPTPAVS
DEG_SCF_FBW7_1
0.3056
p.N1504Y
DO52211
LIHC
ICGC
PPTPAVS
DEG_SCF_FBW7_1
0.3056
p.R1506C
TCGA-FR-A726
SKCM
TCGA
PPTPAVS
DEG_SCF_FBW7_1
0.25
p.R1506C
DO48665
SKCM
ICGC
PPTPAVS
DEG_SCF_FBW7_1
0.25
p.R1506H
TCGA-GN-A268
SKCM
TCGA
PPTPAVS
DEG_SCF_FBW7_1
0.25
p.R1506H
DO37477
SKCM
ICGC
PPTPAVS
DEG_SCF_FBW7_1
0.25
p.S1507L
TCGA-GU-AATO
BLCA
TCGA
PPTPAVS
DEG_SCF_FBW7_1
0.6667
p.S1507L
DO51893
BLCA
ICGC
PPTPAVS
DEG_SCF_FBW7_1
0.6667
p.N1504S
DO233708
GACA
ICGC
PPTPAVS
DEG_SCF_FBW7_1
0.3056
p.S1510I
DO229034
LICA
ICGC
PPTPAVS
DEG_SCF_FBW7_1
0.1389
p.P1498H
SIDM00333
Endometrial Carcinoma
GDSC
PPTPAVS
DEG_SCF_FBW7_1
0.6583
p.P1498H
ACH-000988
Endometrial/Uterine Cancer
CCLE
PPTPAVS
DEG_SCF_FBW7_1
0.6583
p.P1498H
MFE-319
endometrium
COSMIC
PPTPAVS
DEG_SCF_FBW7_1
0.6583
Drug responses associated with SMCHD1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PPTPAVS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A6NHR9
Structural maintenance of chromosomes flexible hinge domain-containing protein 1
DEG_SCF_FBW7_1
1497:1503
PPTPAVS
FBXW7
0.5349
More...