DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PPTPDLE
Uniprot ID:
Q8NHG7
Source protein:
Small VCP/p97-interacting protein
Source gene:
SVIP
Class:
DEG_SCF_FBW7_2
Location:
13:19
E3 ligase:
FBXW7
DEGRON score:
0.5655
ASA_SCORE:
94.1429
COIL:
0.6999
CONS_SCORE:
0.8391
DSS_SCORE:
0.5838
HELIX:
0.2889
FCONS_SCORE:
0.8744
RIG_SCORE:
0.6642
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A29S
TCGA-85-8276
LUSC
TCGA
PPTPDLE
DEG_SCF_FBW7_2
0.0556
p.A29S
DO26436
LUSC
ICGC
PPTPDLE
DEG_SCF_FBW7_2
0.0556
p.A28D
TCGA-A5-A1OF
UCEC
TCGA
PPTPDLE
DEG_SCF_FBW7_2
0.0833
p.A28D
DO42568
UCEC
ICGC
PPTPDLE
DEG_SCF_FBW7_2
0.0833
p.R22I
TCGA-AP-A051
UCEC
TCGA
PPTPDLE
DEG_SCF_FBW7_2
0.25
p.R22I
DO42673
UCEC
ICGC
PPTPDLE
DEG_SCF_FBW7_2
0.25
p.P6H
TCGA-D3-A1QA
SKCM
TCGA
PPTPDLE
DEG_SCF_FBW7_2
0.1389
p.P6H
DO47469
SKCM
ICGC
PPTPDLE
DEG_SCF_FBW7_2
0.1389
p.P14H
TCGA-DD-AAVV
LIHC
TCGA
PPTPDLE
DEG_SCF_FBW7_2
0.6583
p.P14H
DO223912
LIHC
ICGC
PPTPDLE
DEG_SCF_FBW7_2
0.6583
p.G9W
TCGA-EM-A2CL
THCA
TCGA
PPTPDLE
DEG_SCF_FBW7_2
0.2222
p.G9W
DO40640
THCA
ICGC
PPTPDLE
DEG_SCF_FBW7_2
0.2222
p.K21N
TCGA-FZ-5919
PAAD
TCGA
PPTPDLE
DEG_SCF_FBW7_2
0.2778
p.K21N
DO218972
PAAD
ICGC
PPTPDLE
DEG_SCF_FBW7_2
0.2778
p.A26V
TCGA-XK-AAIW
PRAD
TCGA
PPTPDLE
DEG_SCF_FBW7_2
0.1389
p.A26V
DO51407
PRAD
ICGC
PPTPDLE
DEG_SCF_FBW7_2
0.1389
p.A29E
DO230463
PACA
ICGC
PPTPDLE
DEG_SCF_FBW7_2
0.0556
Drug responses associated with SVIP mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PPTPDLE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8NHG7
Small VCP/p97-interacting protein
DEG_SCF_FBW7_2
13:19
PPTPDLE
FBXW7
0.5655
More...