DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PPTPETS
Uniprot ID:
P04141
Source protein:
Granulocyte-macrophage colony-stimulating factor
Source gene:
CSF2
Class:
DEG_SCF_FBW7_1
Location:
106:112
E3 ligase:
FBXW7
DEGRON score:
0.8558
ASA_SCORE:
73.1571
COIL:
0.883
CONS_SCORE:
0.8864
DSS_SCORE:
0.3493
HELIX:
0.0811
FCONS_SCORE:
1.2725
RIG_SCORE:
0.7048
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.F120L
TCGA-77-8009
LUSC
TCGA
PPTPETS
DEG_SCF_FBW7_1
0.1111
p.F120L
DO27200
LUSC
ICGC
PPTPETS
DEG_SCF_FBW7_1
0.1111
p.P109L
TCGA-A5-A0G1
UCEC
TCGA
PPTPETS
DEG_SCF_FBW7_1
0.7582
p.P109L
DO42472
UCEC
ICGC
PPTPETS
DEG_SCF_FBW7_1
0.7582
p.S122N
TCGA-FW-A3R5
SKCM
TCGA
PPTPETS
DEG_SCF_FBW7_1
0.0556
p.S122N
DO37406
SKCM
ICGC
PPTPETS
DEG_SCF_FBW7_1
0.0556
p.T108I
DO48374
BLCA
ICGC
PPTPETS
DEG_SCF_FBW7_1
0.7078
p.I117T
DO228483
BRCA
ICGC
PPTPETS
DEG_SCF_FBW7_1
0.1944
p.I117T
DO230334
COCA
ICGC
PPTPETS
DEG_SCF_FBW7_1
0.1944
p.I117T
DO229010
COCA
ICGC
PPTPETS
DEG_SCF_FBW7_1
0.1944
p.I117T
DO229013
COCA
ICGC
PPTPETS
DEG_SCF_FBW7_1
0.1944
p.I117T
DO229016
COCA
ICGC
PPTPETS
DEG_SCF_FBW7_1
0.1944
p.I117T
DO229003
COCA
ICGC
PPTPETS
DEG_SCF_FBW7_1
0.1944
p.I117T
DO229005
COCA
ICGC
PPTPETS
DEG_SCF_FBW7_1
0.1944
p.I117T
DO229505
LAML
ICGC
PPTPETS
DEG_SCF_FBW7_1
0.1944
p.Q103H
DO27811
MALY
ICGC
PPTPETS
DEG_SCF_FBW7_1
0.25
p.S112F
DO222647
MELA
ICGC
PPTPETS
DEG_SCF_FBW7_1
0.7982
p.S99R
DO229242
THCA
ICGC
PPTPETS
DEG_SCF_FBW7_1
0.1389
p.T115I
SIDM01016
T-Lymphoblastic Leukemia
GDSC
PPTPETS
DEG_SCF_FBW7_1
0.25
p.T115I
SIDM00104
Mesothelioma
GDSC
PPTPETS
DEG_SCF_FBW7_1
0.25
p.T115I
SIDM00475
Ovarian Carcinoma
GDSC
PPTPETS
DEG_SCF_FBW7_1
0.25
p.T115I
SIDM01148
Plasma Cell Myeloma
GDSC
PPTPETS
DEG_SCF_FBW7_1
0.25
p.T115I
SIDM01263
T-Lymphoblastic Leukemia
GDSC
PPTPETS
DEG_SCF_FBW7_1
0.25
p.T115I
SIDM00510
Small Cell Lung Carcinoma
GDSC
PPTPETS
DEG_SCF_FBW7_1
0.25
p.T115I
SIDM00756
Non-Small Cell Lung Carcinoma
GDSC
PPTPETS
DEG_SCF_FBW7_1
0.25
p.T115I
SIDM00736
Non-Cancerous
GDSC
PPTPETS
DEG_SCF_FBW7_1
0.25
p.P109S
SIDM00284
Melanoma
GDSC
PPTPETS
DEG_SCF_FBW7_1
0.6752
p.P109S
ACH-000805
Skin Cancer
CCLE
PPTPETS
DEG_SCF_FBW7_1
0.6752
p.P109S
COLO-679
skin
COSMIC
PPTPETS
DEG_SCF_FBW7_1
0.6752
p.P106S
ACH-000695
Lung Cancer
CCLE
PPTPETS
DEG_SCF_FBW7_1
0.6752
Drug responses associated with CSF2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PPTPETS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P04141
Granulocyte-macrophage colony-stimulating factor
DEG_SCF_FBW7_1
106:112
PPTPETS
FBXW7
0.8558
More...