DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PPTPVNS
Uniprot ID:
Q6NTF9
Source protein:
Rhomboid domain-containing protein 2
Source gene:
RHBDD2
Class:
DEG_SCF_FBW7_1
Location:
332:338
E3 ligase:
FBXW7
DEGRON score:
0.9963
ASA_SCORE:
70.4714
COIL:
0.9241
CONS_SCORE:
0.3463
DSS_SCORE:
0.5165
HELIX:
0.0227
FCONS_SCORE:
0.7934
RIG_SCORE:
0.6364
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G325C
TCGA-05-4427
LUAD
TCGA
PPTPVNS
DEG_SCF_FBW7_1
0.1389
p.G325C
DO23666
LUAD
ICGC
PPTPVNS
DEG_SCF_FBW7_1
0.1389
p.P333L
TCGA-AP-A1DK
UCEC
TCGA
PPTPVNS
DEG_SCF_FBW7_1
0.6471
p.P333L
DO42033
UCEC
ICGC
PPTPVNS
DEG_SCF_FBW7_1
0.6471
p.S344Y
TCGA-AP-A1DV
UCEC
TCGA
PPTPVNS
DEG_SCF_FBW7_1
0.1667
p.S344Y
DO43186
UCEC
ICGC
PPTPVNS
DEG_SCF_FBW7_1
0.1667
p.T334M
TCGA-AX-A05Y
UCEC
TCGA
PPTPVNS
DEG_SCF_FBW7_1
0.7423
p.T334M
DO42897
UCEC
ICGC
PPTPVNS
DEG_SCF_FBW7_1
0.7423
p.G329V
TCGA-B0-4815
KIRC
TCGA
PPTPVNS
DEG_SCF_FBW7_1
0.25
p.G329V
DO18661
KIRC
ICGC
PPTPVNS
DEG_SCF_FBW7_1
0.25
p.S327F
TCGA-EE-A2A1
SKCM
TCGA
PPTPVNS
DEG_SCF_FBW7_1
0.1944
p.S327F
DO38045
SKCM
ICGC
PPTPVNS
DEG_SCF_FBW7_1
0.1944
p.P339S
TCGA-EE-A2MS
SKCM
TCGA
PPTPVNS
DEG_SCF_FBW7_1
0.3056
p.P339S
DO37567
SKCM
ICGC
PPTPVNS
DEG_SCF_FBW7_1
0.3056
p.L347S
TCGA-FI-A2D5
UCEC
TCGA
PPTPVNS
DEG_SCF_FBW7_1
0.0833
p.L347S
DO41331
UCEC
ICGC
PPTPVNS
DEG_SCF_FBW7_1
0.0833
Drug responses associated with RHBDD2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PPTPVNS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6NTF9
Rhomboid domain-containing protein 2
DEG_SCF_FBW7_1
332:338
PPTPVNS
FBXW7
0.9963
More...