DegronMD: protein-targeted degradation, mutation and drug response to degrons
Home
(current)
Browse
Proteins/Degrons
Mutations
Drug response
Network-rewiring
Drug resistance
Search
Tutorial
Download
Contact
Links
BSML
CPH
CGC
Degron:
PPVAMVAPQ
Uniprot ID:
Q9H3P2
Source protein:
Negative elongation factor A
Source gene:
NELFA
Class:
DEG_SIAH_1
Location:
410:418
E3 ligase:
SIAH1,SIAH2,SIAH3
DEGRON score:
0.911
ASA_SCORE:
94.8
COIL:
0.9327
CONS_SCORE:
0.504
DSS_SCORE:
0.6721
HELIX:
0.0251
FCONS_SCORE:
0.9311
RIG_SCORE:
0.7092
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A400V
TCGA-CF-A3MH
BLCA
TCGA
PPVAMVAPQ
DEG_SIAH_1
0.0556
p.A400V
TCGA-XK-AAIW
PRAD
TCGA
PPVAMVAPQ
DEG_SIAH_1
0.0556
p.A400V
DO791
BLCA
ICGC
PPVAMVAPQ
DEG_SIAH_1
0.0556
p.A400V
DO51407
PRAD
ICGC
PPVAMVAPQ
DEG_SIAH_1
0.0556
p.P422L
TCGA-D3-A51G
SKCM
TCGA
PPVAMVAPQ
DEG_SIAH_1
0.2222
p.P422S
TCGA-D3-A51G
SKCM
TCGA
PPVAMVAPQ
DEG_SIAH_1
0.2222
p.P422S
DO47700
SKCM
ICGC
PPVAMVAPQ
DEG_SIAH_1
0.2222
Drug responses associated with NELFA mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PPVAMVAPQ
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9H3P2
Negative elongation factor A
DEG_SIAH_1
410:418
PPVAMVAPQ
SIAH1,SIAH2,SIAH3
0.911
More...