DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PPVTPERS
Uniprot ID:
Q96DN2
Source protein:
von Willebrand factor C and EGF domain-containing protein
Source gene:
VWCE
Class:
DEG_SCF_FBW7_1
Location:
868:875
E3 ligase:
FBXW7
DEGRON score:
0.9888
ASA_SCORE:
91.4875
COIL:
0.917
CONS_SCORE:
0.5284
DSS_SCORE:
0.6921
HELIX:
0.0355
FCONS_SCORE:
1.3347
RIG_SCORE:
0.6283
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S885F
TCGA-55-7907
LUAD
TCGA
PPVTPERS
DEG_SCF_FBW7_1
0.0556
p.P858H
TCGA-AX-A2HD
UCEC
TCGA
PPVTPERS
DEG_SCF_FBW7_1
0.0556
p.P858H
DO42608
UCEC
ICGC
PPVTPERS
DEG_SCF_FBW7_1
0.0556
p.P865S
TCGA-D3-A5GR
SKCM
TCGA
PPVTPERS
DEG_SCF_FBW7_1
0.25
p.P865S
DO47436
SKCM
ICGC
PPVTPERS
DEG_SCF_FBW7_1
0.25
p.L859V
TCGA-D8-A1XL
BRCA
TCGA
PPVTPERS
DEG_SCF_FBW7_1
0.0833
p.L859V
DO1648
BRCA
ICGC
PPVTPERS
DEG_SCF_FBW7_1
0.0833
p.P862Q
TCGA-ER-A19T
SKCM
TCGA
PPVTPERS
DEG_SCF_FBW7_1
0.1667
p.S885Y
TCGA-ND-A4WC
UCS
TCGA
PPVTPERS
DEG_SCF_FBW7_1
0.0556
p.A881D
DO229015
LICA
ICGC
PPVTPERS
DEG_SCF_FBW7_1
0.1667
p.S879F
SIDM01021
Glioblastoma
GDSC
PPVTPERS
DEG_SCF_FBW7_1
0.2222
p.S879F
ACH-002223
Brain Cancer
CCLE
PPVTPERS
DEG_SCF_FBW7_1
0.2222
p.S879F
D-245MG
central_nervous_system
COSMIC
PPVTPERS
DEG_SCF_FBW7_1
0.2222
p.G880V
SIDM00258
Neuroblastoma
GDSC
PPVTPERS
DEG_SCF_FBW7_1
0.1944
p.G880V
ACH-002279
Neuroblastoma
CCLE
PPVTPERS
DEG_SCF_FBW7_1
0.1944
p.G880V
NB12
autonomic_ganglia
COSMIC
PPVTPERS
DEG_SCF_FBW7_1
0.1944
p.G880W
SIDM00258
Neuroblastoma
GDSC
PPVTPERS
DEG_SCF_FBW7_1
0.1944
p.G880W
ACH-002279
Neuroblastoma
CCLE
PPVTPERS
DEG_SCF_FBW7_1
0.1944
p.G880W
NB12
autonomic_ganglia
COSMIC
PPVTPERS
DEG_SCF_FBW7_1
0.1944
p.A864S
SIDM00746
Non-Small Cell Lung Carcinoma
GDSC
PPVTPERS
DEG_SCF_FBW7_1
0.2222
p.A864S
ACH-000766
Lung Cancer
CCLE
PPVTPERS
DEG_SCF_FBW7_1
0.2222
p.A864S
NCI-H1648
lung
COSMIC
PPVTPERS
DEG_SCF_FBW7_1
0.2222
Drug responses associated with VWCE mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PPVTPERS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96DN2
von Willebrand factor C and EGF domain-containing protein
DEG_SCF_FBW7_1
868:875
PPVTPERS
FBXW7
0.9888
More...