DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PQGTPVST
Uniprot ID:
O15034
Source protein:
RIMS-binding protein 2
Source gene:
RIMBP2
Class:
DEG_SCF_FBW7_1
Location:
659:666
E3 ligase:
FBXW7
DEGRON score:
0.8582
ASA_SCORE:
87.7125
COIL:
0.9299
CONS_SCORE:
0.446
DSS_SCORE:
0.6648
HELIX:
0.043
FCONS_SCORE:
1.028
RIG_SCORE:
0.6192
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R674W
TCGA-EY-A1GU
UCEC
TCGA
PQGTPVST
DEG_SCF_FBW7_1
0.1111
p.R674W
DO41518
UCEC
ICGC
PQGTPVST
DEG_SCF_FBW7_1
0.1111
p.P659Q
TCGA-FS-A1ZJ
SKCM
TCGA
PQGTPVST
DEG_SCF_FBW7_1
0.7035
p.P659Q
DO37956
SKCM
ICGC
PQGTPVST
DEG_SCF_FBW7_1
0.7035
p.L656M
TCGA-UZ-A9PS
KIRP
TCGA
PQGTPVST
DEG_SCF_FBW7_1
0.25
p.L656M
DO219709
KIRP
ICGC
PQGTPVST
DEG_SCF_FBW7_1
0.25
p.Q658K
DO228974
LICA
ICGC
PQGTPVST
DEG_SCF_FBW7_1
0.3056
p.S649L
DO224745
PACA
ICGC
PQGTPVST
DEG_SCF_FBW7_1
0.0556
p.E675V
DO229259
THCA
ICGC
PQGTPVST
DEG_SCF_FBW7_1
0.0833
p.L656Q
SIDM00537
Colorectal Carcinoma
GDSC
PQGTPVST
DEG_SCF_FBW7_1
0.25
p.L656Q
ACH-000982
Colon/Colorectal Cancer
CCLE
PQGTPVST
DEG_SCF_FBW7_1
0.25
p.L656Q
ACH-001345
Colon/Colorectal Cancer
CCLE
PQGTPVST
DEG_SCF_FBW7_1
0.25
Drug responses associated with RIMBP2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PQGTPVST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15034
RIMS-binding protein 2
DEG_SCF_FBW7_1
659:666
PQGTPVST
FBXW7
0.8582
More...