DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PQKTPPPS
Uniprot ID:
Q8N5Q1
Source protein:
Golgi associated RAB2 interactor protein 5B
Source gene:
GARIN5B
Class:
DEG_SCF_FBW7_1
Location:
499:506
E3 ligase:
FBXW7
DEGRON score:
0.99
ASA_SCORE:
104.975
COIL:
0.9599
CONS_SCORE:
0.5449
DSS_SCORE:
0.7577
HELIX:
0.0225
FCONS_SCORE:
1.0547
RIG_SCORE:
0.4992
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V495I
TCGA-EY-A1GF
UCEC
TCGA
PQKTPPPS
DEG_SCF_FBW7_1
0.2222
p.V495I
DO41704
UCEC
ICGC
PQKTPPPS
DEG_SCF_FBW7_1
0.2222
p.A494V
DO233270
GACA
ICGC
PQKTPPPS
DEG_SCF_FBW7_1
0.1944
p.P489S
DO220902
MELA
ICGC
PQKTPPPS
DEG_SCF_FBW7_1
0.0556
p.P489L
DO220902
MELA
ICGC
PQKTPPPS
DEG_SCF_FBW7_1
0.0556
p.P489L
DO37432
SKCM
ICGC
PQKTPPPS
DEG_SCF_FBW7_1
0.0556
p.P498S
DO222632
MELA
ICGC
PQKTPPPS
DEG_SCF_FBW7_1
0.3056
p.A497T
DO229275
THCA
ICGC
PQKTPPPS
DEG_SCF_FBW7_1
0.2778
Drug responses associated with GARIN5B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PQKTPPPS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8N5Q1
Golgi associated RAB2 interactor protein 5B
DEG_SCF_FBW7_1
499:506
PQKTPPPS
FBXW7
0.99
More...