DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PQSTPRNT
Uniprot ID:
Q9BY44
Source protein:
Eukaryotic translation initiation factor 2A
Source gene:
EIF2A
Class:
DEG_SCF_FBW7_1
Location:
515:522
E3 ligase:
FBXW7
DEGRON score:
0.9543
ASA_SCORE:
96.7
COIL:
0.9128
CONS_SCORE:
0.2263
DSS_SCORE:
0.7834
HELIX:
0.0353
FCONS_SCORE:
0.9833
RIG_SCORE:
0.5726
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R520Q
TCGA-AJ-A3EL
UCEC
TCGA
PQSTPRNT
DEG_SCF_FBW7_1
0.6218
p.R520Q
TCGA-AZ-4315
COAD
TCGA
PQSTPRNT
DEG_SCF_FBW7_1
0.6218
p.D530Y
TCGA-CA-6717
COAD
TCGA
PQSTPRNT
DEG_SCF_FBW7_1
0.1111
p.G532R
DO2688
BRCA
ICGC
PQSTPRNT
DEG_SCF_FBW7_1
0.0556
p.A529T
DO222946
BTCA
ICGC
PQSTPRNT
DEG_SCF_FBW7_1
0.1389
p.R515Q
DO8842
COAD
ICGC
PQSTPRNT
DEG_SCF_FBW7_1
0.7329
p.R515Q
DO41542
UCEC
ICGC
PQSTPRNT
DEG_SCF_FBW7_1
0.7329
p.D525Y
DO8264
COAD
ICGC
PQSTPRNT
DEG_SCF_FBW7_1
0.25
p.S517N
DO233766
GACA
ICGC
PQSTPRNT
DEG_SCF_FBW7_1
0.7069
p.Q516R
DO44786
LICA
ICGC
PQSTPRNT
DEG_SCF_FBW7_1
0.6218
p.K518I
DO26425
LUSC
ICGC
PQSTPRNT
DEG_SCF_FBW7_1
0.7531
p.P506S
DO27943
ORCA
ICGC
PQSTPRNT
DEG_SCF_FBW7_1
0.5278
p.K513N
DO41903
UCEC
ICGC
PQSTPRNT
DEG_SCF_FBW7_1
0.2778
p.E527K
ACH-000337
Lung Cancer
CCLE
PQSTPRNT
DEG_SCF_FBW7_1
0.1944
p.E527K
NCI-H3122
lung
COSMIC
PQSTPRNT
DEG_SCF_FBW7_1
0.1944
Drug responses associated with EIF2A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
SIDM00959
LAML|acute_myeloid_leukaemia
p.H491R (No)
GDSC
Salubrinal
13.496
SIDM00660
COREAD|large_intestine
p.Q499R (No)
GDSC
Salubrinal
31.5066
SIDM00427
UNCLASSIFIED|rhabdomyosarcoma
p.E463* (No)
GDSC
Salubrinal
30.3679
SIDM01111
UNCLASSIFIED|ewings_sarcoma
p.E571A (No)
GDSC
Salubrinal
30.9726
SIDM00594
LAML|acute_myeloid_leukaemia
p.H491R (No)
GDSC
Salubrinal
9.734
All proteins holding degron of PQSTPRNT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9BY44
Eukaryotic translation initiation factor 2A
DEG_SCF_FBW7_1
515:522
PQSTPRNT
FBXW7
0.9543
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