DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PRAALDGLA
Uniprot ID:
P58304
Source protein:
Visual system homeobox 2
Source gene:
VSX2
Class:
DEG_APCC_DBOX_1
Location:
49:57
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9627
ASA_SCORE:
62.3556
COIL:
0.8139
CONS_SCORE:
0.3944
DSS_SCORE:
0.4745
HELIX:
0.1464
FCONS_SCORE:
0.8358
RIG_SCORE:
0.6995
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A63V
DO234341
ESAD
ICGC
PRAALDGLA
DEG_APCC_DBOX_1
0.1667
p.A64V
DO234461
ESAD
ICGC
PRAALDGLA
DEG_APCC_DBOX_1
0.1389
p.P49L
DO233926
GACA
ICGC
PRAALDGLA
DEG_APCC_DBOX_1
0.6471
p.A57S
DO229037
LICA
ICGC
PRAALDGLA
DEG_APCC_DBOX_1
0.6477
p.S46T
DO229138
LMS
ICGC
PRAALDGLA
DEG_APCC_DBOX_1
0.25
p.R65H
SIDM01314
Colorectal Carcinoma
GDSC
PRAALDGLA
DEG_APCC_DBOX_1
0.1111
p.R65H
ACH-000866
Lung Cancer
CCLE
PRAALDGLA
DEG_APCC_DBOX_1
0.1111
p.R65C
SIDM01129
Small Cell Lung Carcinoma
GDSC
PRAALDGLA
DEG_APCC_DBOX_1
0.1111
p.R65C
ACH-000816
Lung Cancer
CCLE
PRAALDGLA
DEG_APCC_DBOX_1
0.1111
Drug responses associated with VSX2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PRAALDGLA
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P58304
Visual system homeobox 2
DEG_APCC_DBOX_1
49:57
PRAALDGLA
APC,CDC20,FZR1
0.9627
More...