DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PRAHLPFVG
Uniprot ID:
A2A3L6
Source protein:
Tetratricopeptide repeat protein 24
Source gene:
TTC24
Class:
DEG_APCC_DBOX_1
Location:
527:535
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9077
ASA_SCORE:
57.3444
COIL:
0.7543
CONS_SCORE:
0.3886
DSS_SCORE:
0.4901
HELIX:
0.0413
FCONS_SCORE:
1.1157
RIG_SCORE:
0.6694
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P527L
TCGA-44-6144
LUAD
TCGA
PRAHLPFVG
DEG_APCC_DBOX_1
0.6471
p.P527L
DO24190
LUAD
ICGC
PRAHLPFVG
DEG_APCC_DBOX_1
0.6471
p.I522V
TCGA-AP-A0LE
UCEC
TCGA
PRAHLPFVG
DEG_APCC_DBOX_1
0.1944
p.I522V
DO43418
UCEC
ICGC
PRAHLPFVG
DEG_APCC_DBOX_1
0.1944
p.E542K
TCGA-AP-A1DK
UCEC
TCGA
PRAHLPFVG
DEG_APCC_DBOX_1
0.1389
p.E542K
DO42033
UCEC
ICGC
PRAHLPFVG
DEG_APCC_DBOX_1
0.1389
p.A520T
TCGA-EE-A29S
SKCM
TCGA
PRAHLPFVG
DEG_APCC_DBOX_1
0.1389
p.A520T
DO37936
SKCM
ICGC
PRAHLPFVG
DEG_APCC_DBOX_1
0.1389
p.A541V
TCGA-T2-A6X2
HNSC
TCGA
PRAHLPFVG
DEG_APCC_DBOX_1
0.1667
p.A541V
DO219071
HNSC
ICGC
PRAHLPFVG
DEG_APCC_DBOX_1
0.1667
p.F533C
DO8264
COAD
ICGC
PRAHLPFVG
DEG_APCC_DBOX_1
0.5996
p.P532A
DO229047
LICA
ICGC
PRAHLPFVG
DEG_APCC_DBOX_1
0.6392
p.P525L
DO50970
LICA
ICGC
PRAHLPFVG
DEG_APCC_DBOX_1
0.2778
p.A529V
DO50970
LICA
ICGC
PRAHLPFVG
DEG_APCC_DBOX_1
0.5825
p.A529V
SIDM01318
Hepatocellular Carcinoma
GDSC
PRAHLPFVG
DEG_APCC_DBOX_1
0.5825
p.A529V
ACH-001318
Liver Cancer
CCLE
PRAHLPFVG
DEG_APCC_DBOX_1
0.5825
p.G537C
SIDM02049
Pancreatic Carcinoma
GDSC
PRAHLPFVG
DEG_APCC_DBOX_1
0.2778
p.G518D
SIDM00499
Prostate Carcinoma
GDSC
PRAHLPFVG
DEG_APCC_DBOX_1
0.0833
p.G518D
ACH-000956
Prostate Cancer
CCLE
PRAHLPFVG
DEG_APCC_DBOX_1
0.0833
p.G518D
22RV1
prostate
COSMIC
PRAHLPFVG
DEG_APCC_DBOX_1
0.0833
p.I522N
SIDM01117
Small Cell Lung Carcinoma
GDSC
PRAHLPFVG
DEG_APCC_DBOX_1
0.1944
p.I522N
ACH-002176
Lung Cancer
CCLE
PRAHLPFVG
DEG_APCC_DBOX_1
0.1944
p.K519E
SIDM00781
Colorectal Carcinoma
GDSC
PRAHLPFVG
DEG_APCC_DBOX_1
0.2222
p.K519E
SIDM00780
Colorectal Carcinoma
GDSC
PRAHLPFVG
DEG_APCC_DBOX_1
0.2222
p.K519E
ACH-000967
Colon/Colorectal Cancer
CCLE
PRAHLPFVG
DEG_APCC_DBOX_1
0.2222
p.K519E
ACH-001199
Colon/Colorectal Cancer
CCLE
PRAHLPFVG
DEG_APCC_DBOX_1
0.2222
p.K519E
SNU-C2B
large_intestine
COSMIC
PRAHLPFVG
DEG_APCC_DBOX_1
0.2222
p.Y543S
CAL-27
upper_aerodigestive_tract
COSMIC
PRAHLPFVG
DEG_APCC_DBOX_1
0.1111
Drug responses associated with TTC24 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PRAHLPFVG
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A2A3L6
Tetratricopeptide repeat protein 24
DEG_APCC_DBOX_1
527:535
PRAHLPFVG
APC,CDC20,FZR1
0.9077
More...