DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PRAPLGPVP
Uniprot ID:
Q6ZRS2
Source protein:
Helicase SRCAP
Source gene:
SRCAP
Class:
DEG_APCC_DBOX_1
Location:
1015:1023
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9201
ASA_SCORE:
83.6667
COIL:
0.9131
CONS_SCORE:
0.3167
DSS_SCORE:
0.5509
HELIX:
0.012
FCONS_SCORE:
0.9743
RIG_SCORE:
0.6267
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E1005Q
TCGA-50-5936
LUAD
TCGA
PRAPLGPVP
DEG_APCC_DBOX_1
0.0556
p.E1005Q
DO24237
LUAD
ICGC
PRAPLGPVP
DEG_APCC_DBOX_1
0.0556
p.S1033L
TCGA-77-A5GB
LUSC
TCGA
PRAPLGPVP
DEG_APCC_DBOX_1
0.0556
p.S1033L
DO45439
LUSC
ICGC
PRAPLGPVP
DEG_APCC_DBOX_1
0.0556
p.R1007W
TCGA-80-5611
LUAD
TCGA
PRAPLGPVP
DEG_APCC_DBOX_1
0.1111
p.R1007W
TCGA-AZ-4323
COAD
TCGA
PRAPLGPVP
DEG_APCC_DBOX_1
0.1111
p.R1007W
TCGA-EE-A3J7
SKCM
TCGA
PRAPLGPVP
DEG_APCC_DBOX_1
0.1111
p.R1007W
DO7886
COAD
ICGC
PRAPLGPVP
DEG_APCC_DBOX_1
0.1111
p.R1007W
DO23822
LUAD
ICGC
PRAPLGPVP
DEG_APCC_DBOX_1
0.1111
p.R1007W
DO48770
SKCM
ICGC
PRAPLGPVP
DEG_APCC_DBOX_1
0.1111
p.P1015T
TCGA-B3-3925
KIRP
TCGA
PRAPLGPVP
DEG_APCC_DBOX_1
0.5919
p.P1015T
DO20867
KIRP
ICGC
PRAPLGPVP
DEG_APCC_DBOX_1
0.5919
p.P1023R
TCGA-D6-8569
HNSC
TCGA
PRAPLGPVP
DEG_APCC_DBOX_1
0.6401
p.P1023R
DO14454
HNSC
ICGC
PRAPLGPVP
DEG_APCC_DBOX_1
0.6401
p.E1031Q
TCGA-E7-A85H
BLCA
TCGA
PRAPLGPVP
DEG_APCC_DBOX_1
0.1111
p.E1031Q
DO219018
BLCA
ICGC
PRAPLGPVP
DEG_APCC_DBOX_1
0.1111
p.R1016Q
TCGA-HU-A4H8
STAD
TCGA
PRAPLGPVP
DEG_APCC_DBOX_1
0.7329
p.R1016Q
DO47869
STAD
ICGC
PRAPLGPVP
DEG_APCC_DBOX_1
0.7329
p.A1017V
DO222809
COCA
ICGC
PRAPLGPVP
DEG_APCC_DBOX_1
0.5825
p.R1016W
SIDM00857
Melanoma
GDSC
PRAPLGPVP
DEG_APCC_DBOX_1
0.8634
p.R1016W
ACH-000572
Skin Cancer
CCLE
PRAPLGPVP
DEG_APCC_DBOX_1
0.8634
p.R1016W
G-361
skin
COSMIC
PRAPLGPVP
DEG_APCC_DBOX_1
0.8634
p.R1025Q
SIDM00388
B-Cell Non-Hodgkin's Lymphoma
GDSC
PRAPLGPVP
DEG_APCC_DBOX_1
0.2778
p.R1025Q
ACH-002272
Lymphoma
CCLE
PRAPLGPVP
DEG_APCC_DBOX_1
0.2778
p.R1025Q
MHH-PREB-1
haematopoietic_and_lymphoid_tissue
COSMIC
PRAPLGPVP
DEG_APCC_DBOX_1
0.2778
p.V1009E
SIDM00163
Biliary Tract Carcinoma
GDSC
PRAPLGPVP
DEG_APCC_DBOX_1
0.1667
p.L1029V
NCI-SNU-1
stomach
COSMIC
PRAPLGPVP
DEG_APCC_DBOX_1
0.1667
p.L1029V
MRK-nu-1
breast
COSMIC
PRAPLGPVP
DEG_APCC_DBOX_1
0.1667
p.V1031A
Jurkat
haematopoietic_and_lymphoid_tissue
COSMIC
PRAPLGPVP
DEG_APCC_DBOX_1
0.1111
Drug responses associated with SRCAP mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PRAPLGPVP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6ZRS2
Helicase SRCAP
DEG_APCC_DBOX_1
1015:1023
PRAPLGPVP
APC,CDC20,FZR1
0.9201
More...