DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PRDGLTPVP
Uniprot ID:
Q6ZRS2
Source protein:
Helicase SRCAP
Source gene:
SRCAP
Class:
DEG_APCC_DBOX_1
Location:
1317:1325
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9702
ASA_SCORE:
81.0444
COIL:
0.8761
CONS_SCORE:
0.3641
DSS_SCORE:
0.5286
HELIX:
0.0302
FCONS_SCORE:
0.9674
RIG_SCORE:
0.6729
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V1309L
TCGA-37-4141
LUSC
TCGA
PRDGLTPVP
DEG_APCC_DBOX_1
0.1111
p.R1318Q
TCGA-B5-A3FC
UCEC
TCGA
PRDGLTPVP
DEG_APCC_DBOX_1
0.7329
p.P1334L
TCGA-CG-5721
STAD
TCGA
PRDGLTPVP
DEG_APCC_DBOX_1
0.0833
p.P1334L
TCGA-D8-A1JB
BRCA
TCGA
PRDGLTPVP
DEG_APCC_DBOX_1
0.0833
p.R1318W
TCGA-LN-A49U
ESCA
TCGA
PRDGLTPVP
DEG_APCC_DBOX_1
0.8634
p.R1332L
TCGA-NJ-A4YF
LUAD
TCGA
PRDGLTPVP
DEG_APCC_DBOX_1
0.1389
p.A1330D
DO49657
LIHC
ICGC
PRDGLTPVP
DEG_APCC_DBOX_1
0.1944
p.P1333S
DO228567
PRAD
ICGC
PRDGLTPVP
DEG_APCC_DBOX_1
0.1111
p.A1330E
SIDM00598
Squamous Cell Lung Carcinoma
GDSC
PRDGLTPVP
DEG_APCC_DBOX_1
0.1944
p.A1330E
ACH-000843
Lung Cancer
CCLE
PRDGLTPVP
DEG_APCC_DBOX_1
0.1944
p.A1330E
HARA
lung
COSMIC
PRDGLTPVP
DEG_APCC_DBOX_1
0.1944
p.V1324I
ACH-000635
Ovarian Cancer
CCLE
PRDGLTPVP
DEG_APCC_DBOX_1
0.5965
Drug responses associated with SRCAP mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PRDGLTPVP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6ZRS2
Helicase SRCAP
DEG_APCC_DBOX_1
1317:1325
PRDGLTPVP
APC,CDC20,FZR1
0.9702
More...