DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PRDTLYRVP
Uniprot ID:
Q6L9W6
Source protein:
Beta-1,4-N-acetylgalactosaminyltransferase 3
Source gene:
B4GALNT3
Class:
DEG_APCC_DBOX_1
Location:
326:334
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.696
ASA_SCORE:
55.0333
COIL:
0.6522
CONS_SCORE:
0.4139
DSS_SCORE:
0.4683
HELIX:
0.1636
FCONS_SCORE:
1.0263
RIG_SCORE:
0.7476
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R323Q
TCGA-22-5480
LUSC
TCGA
PRDTLYRVP
DEG_APCC_DBOX_1
0.25
p.R323Q
DO26786
LUSC
ICGC
PRDTLYRVP
DEG_APCC_DBOX_1
0.25
p.P337S
TCGA-63-A5MU
LUSC
TCGA
PRDTLYRVP
DEG_APCC_DBOX_1
0.25
p.P337S
DO219165
LUSC
ICGC
PRDTLYRVP
DEG_APCC_DBOX_1
0.25
p.R332L
TCGA-EE-A183
SKCM
TCGA
PRDTLYRVP
DEG_APCC_DBOX_1
0.7316
p.R332L
DO37715
SKCM
ICGC
PRDTLYRVP
DEG_APCC_DBOX_1
0.7316
p.R342H
DO225216
BRCA
ICGC
PRDTLYRVP
DEG_APCC_DBOX_1
0.1111
p.R342H
DO227480
BRCA
ICGC
PRDTLYRVP
DEG_APCC_DBOX_1
0.1111
p.A319V
DO222794
COCA
ICGC
PRDTLYRVP
DEG_APCC_DBOX_1
0.1389
p.I336L
DO234383
ESAD
ICGC
PRDTLYRVP
DEG_APCC_DBOX_1
0.2778
p.L341P
DO233791
GACA
ICGC
PRDTLYRVP
DEG_APCC_DBOX_1
0.1389
p.V333A
SIDM00232
Kidney Carcinoma
GDSC
PRDTLYRVP
DEG_APCC_DBOX_1
0.6936
p.V333A
NCC021
kidney
COSMIC
PRDTLYRVP
DEG_APCC_DBOX_1
0.6936
p.R327W
SIDM00683
Prostate Carcinoma
GDSC
PRDTLYRVP
DEG_APCC_DBOX_1
0.8634
p.R327W
ACH-000977
lymph_node
CCLE
PRDTLYRVP
DEG_APCC_DBOX_1
0.8634
p.R327W
LNCaP-Clone-FGC
prostate
COSMIC
PRDTLYRVP
DEG_APCC_DBOX_1
0.8634
p.Y331C
ACH-000961
Endometrial/Uterine Cancer
CCLE
PRDTLYRVP
DEG_APCC_DBOX_1
0.5976
p.P334S
ACH-001991
Primary
CCLE
PRDTLYRVP
DEG_APCC_DBOX_1
0.5641
Drug responses associated with B4GALNT3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PRDTLYRVP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6L9W6
Beta-1,4-N-acetylgalactosaminyltransferase 3
DEG_APCC_DBOX_1
326:334
PRDTLYRVP
APC,CDC20,FZR1
0.696
More...