DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PRDTPWDE
Uniprot ID:
Q8NDH2
Source protein:
Leucine-rich repeat transmembrane protein CCDC168
Source gene:
CCDC168
Class:
DEG_SCF_FBW7_2
Location:
2092:2099
E3 ligase:
FBXW7
DEGRON score:
0.7737
ASA_SCORE:
84.45
COIL:
0.8436
CONS_SCORE:
0.5019
DSS_SCORE:
0.6139
HELIX:
0.0385
FCONS_SCORE:
0.9973
RIG_SCORE:
0.7176
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L2088I
TCGA-F5-6814
READ
TCGA
PRDTPWDE
DEG_SCF_FBW7_2
0.2222
p.L2088I
DO36556
READ
ICGC
PRDTPWDE
DEG_SCF_FBW7_2
0.2222
p.Q2086E
DO25320
LUAD
ICGC
PRDTPWDE
DEG_SCF_FBW7_2
0.6111
p.S2089L
DO232842
NACA
ICGC
PRDTPWDE
DEG_SCF_FBW7_2
0.25
p.R2093H
SIDM02015
Colorectal Carcinoma
GDSC
PRDTPWDE
DEG_SCF_FBW7_2
0.7133
p.S2108F
SIDM00068
Colorectal Carcinoma
GDSC
PRDTPWDE
DEG_SCF_FBW7_2
0.5278
p.H2104Y
ACH-000679
Esophageal Cancer
CCLE
PRDTPWDE
DEG_SCF_FBW7_2
0.3056
p.Q2108K
ACH-001853
Bile Duct Cancer
CCLE
PRDTPWDE
DEG_SCF_FBW7_2
0.5278
Drug responses associated with CCDC168 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PRDTPWDE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8NDH2
Leucine-rich repeat transmembrane protein CCDC168
DEG_SCF_FBW7_2
2092:2099
PRDTPWDE
FBXW7
0.7737
More...