DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PRDVLLPVD
Uniprot ID:
Q5JTC6
Source protein:
APC membrane recruitment protein 1
Source gene:
AMER1
Class:
DEG_APCC_DBOX_1
Location:
1048:1056
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9511
ASA_SCORE:
67.8444
COIL:
0.6497
CONS_SCORE:
0.4868
DSS_SCORE:
0.6129
HELIX:
0.084
FCONS_SCORE:
1.1919
RIG_SCORE:
0.7178
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A1040T
TCGA-BH-A203
BRCA
TCGA
PRDVLLPVD
DEG_APCC_DBOX_1
0.1111
p.A1040T
DO2156
BRCA
ICGC
PRDVLLPVD
DEG_APCC_DBOX_1
0.1111
p.V1051M
TCGA-CR-7398
HNSC
TCGA
PRDVLLPVD
DEG_APCC_DBOX_1
0.6097
p.V1051M
DO14782
HNSC
ICGC
PRDVLLPVD
DEG_APCC_DBOX_1
0.6097
p.S1059N
TCGA-MA-AA41
CESC
TCGA
PRDVLLPVD
DEG_APCC_DBOX_1
0.25
p.S1059N
DO219723
CESC
ICGC
PRDVLLPVD
DEG_APCC_DBOX_1
0.25
p.G1066C
DO233272
GACA
ICGC
PRDVLLPVD
DEG_APCC_DBOX_1
0.0556
p.R1045K
DO52695
MALY
ICGC
PRDVLLPVD
DEG_APCC_DBOX_1
0.25
p.S1043G
SIDM00441
Acute Myeloid Leukemia
GDSC
PRDVLLPVD
DEG_APCC_DBOX_1
0.1944
p.S1043G
ACH-002273
Leukemia
CCLE
PRDVLLPVD
DEG_APCC_DBOX_1
0.1944
p.S1043G
ML-2
haematopoietic_and_lymphoid_tissue
COSMIC
PRDVLLPVD
DEG_APCC_DBOX_1
0.1944
p.R1047M
SIDM00939
Non-Small Cell Lung Carcinoma
GDSC
PRDVLLPVD
DEG_APCC_DBOX_1
0.3056
p.R1047M
ACH-000826
Lung Cancer
CCLE
PRDVLLPVD
DEG_APCC_DBOX_1
0.3056
p.R1047M
CAL-12T
lung
COSMIC
PRDVLLPVD
DEG_APCC_DBOX_1
0.3056
Drug responses associated with AMER1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PRDVLLPVD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5JTC6
APC membrane recruitment protein 1
DEG_APCC_DBOX_1
1048:1056
PRDVLLPVD
APC,CDC20,FZR1
0.9511
More...