DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PREPLEPLN
Uniprot ID:
Q9HC77
Source protein:
Centromere protein J
Source gene:
CENPJ
Class:
DEG_APCC_DBOX_1
Location:
1126:1134
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5515
ASA_SCORE:
98.5778
COIL:
0.8973
CONS_SCORE:
0.3069
DSS_SCORE:
0.8026
HELIX:
0.0458
FCONS_SCORE:
1.0205
RIG_SCORE:
0.6112
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R1127S
TCGA-17-Z025
LUAD
TCGA
PREPLEPLN
DEG_APCC_DBOX_1
0.7427
p.P1126S
TCGA-EE-A3J4
SKCM
TCGA
PREPLEPLN
DEG_APCC_DBOX_1
0.5641
p.P1126S
DO48604
SKCM
ICGC
PREPLEPLN
DEG_APCC_DBOX_1
0.5641
p.L1133M
DO229027
LICA
ICGC
PREPLEPLN
DEG_APCC_DBOX_1
0.5999
p.P1126L
DO222880
MELA
ICGC
PREPLEPLN
DEG_APCC_DBOX_1
0.6471
p.P1138S
SIDM00545
Melanoma
GDSC
PREPLEPLN
DEG_APCC_DBOX_1
0.2222
p.P1138S
ACH-000987
Skin Cancer
CCLE
PREPLEPLN
DEG_APCC_DBOX_1
0.2222
p.P1138S
Mewo
skin
COSMIC
PREPLEPLN
DEG_APCC_DBOX_1
0.2222
p.L1130I
SIDM00217
Colorectal Carcinoma
GDSC
PREPLEPLN
DEG_APCC_DBOX_1
0.7174
p.L1130I
ACH-000999
Colon/Colorectal Cancer
CCLE
PREPLEPLN
DEG_APCC_DBOX_1
0.7174
p.L1130I
SNU-1040
large_intestine
COSMIC
PREPLEPLN
DEG_APCC_DBOX_1
0.7174
Drug responses associated with CENPJ mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PREPLEPLN
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9HC77
Centromere protein J
DEG_APCC_DBOX_1
1126:1134
PREPLEPLN
APC,CDC20,FZR1
0.5515
More...