DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PREPLPPIV
Uniprot ID:
Q04721
Source protein:
Neurogenic locus notch homolog protein 2
Source gene:
NOTCH2
Class:
DEG_APCC_DBOX_1
Location:
2297:2305
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9932
ASA_SCORE:
105.4556
COIL:
0.9523
CONS_SCORE:
0.2558
DSS_SCORE:
0.6472
HELIX:
0.0266
FCONS_SCORE:
1.053
RIG_SCORE:
0.7084
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P2311R
TCGA-44-A47G
LUAD
TCGA
PREPLPPIV
DEG_APCC_DBOX_1
0.1667
p.P2311R
DO23681
LUAD
ICGC
PREPLPPIV
DEG_APCC_DBOX_1
0.1667
p.R2298W
TCGA-C5-A2LX
CESC
TCGA
PREPLPPIV
DEG_APCC_DBOX_1
0.8634
p.R2298W
TCGA-IR-A3LI
CESC
TCGA
PREPLPPIV
DEG_APCC_DBOX_1
0.8634
p.R2298W
DO44400
CESC
ICGC
PREPLPPIV
DEG_APCC_DBOX_1
0.8634
p.R2298W
DO49004
CESC
ICGC
PREPLPPIV
DEG_APCC_DBOX_1
0.8634
p.R2298W
DO232861
NACA
ICGC
PREPLPPIV
DEG_APCC_DBOX_1
0.8634
p.R2298Q
DO233254
GACA
ICGC
PREPLPPIV
DEG_APCC_DBOX_1
0.7329
p.P2303S
DO220866
MELA
ICGC
PREPLPPIV
DEG_APCC_DBOX_1
0.5641
p.I2304V
SIDM00374
B-Cell Non-Hodgkin's Lymphoma
GDSC
PREPLPPIV
DEG_APCC_DBOX_1
0.5965
p.P2300S
ACH-002396
Bone Cancer
CCLE
PREPLPPIV
DEG_APCC_DBOX_1
0.5641
p.P2300S
Sarc9371
bone
COSMIC
PREPLPPIV
DEG_APCC_DBOX_1
0.5641
Drug responses associated with NOTCH2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PREPLPPIV
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q04721
Neurogenic locus notch homolog protein 2
DEG_APCC_DBOX_1
2297:2305
PREPLPPIV
APC,CDC20,FZR1
0.9932
More...