DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PRESLDDLF
Uniprot ID:
Q9UPZ3
Source protein:
Hermansky-Pudlak syndrome 5 protein
Source gene:
HPS5
Class:
DEG_APCC_DBOX_1
Location:
713:721
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.581
ASA_SCORE:
76.6889
COIL:
0.5357
CONS_SCORE:
0.3923
DSS_SCORE:
0.0782
HELIX:
0.3438
FCONS_SCORE:
0.9955
RIG_SCORE:
0.8097
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.C727Y
TCGA-A5-A0G1
UCEC
TCGA
PRESLDDLF
DEG_APCC_DBOX_1
0.1667
p.A728T
TCGA-A5-A0G2
UCEC
TCGA
PRESLDDLF
DEG_APCC_DBOX_1
0.1389
p.S731G
TCGA-A8-A07C
BRCA
TCGA
PRESLDDLF
DEG_APCC_DBOX_1
0.0556
p.P726Q
TCGA-D3-A2JD
SKCM
TCGA
PRESLDDLF
DEG_APCC_DBOX_1
0.1944
p.S725F
TCGA-W3-AA1V
SKCM
TCGA
PRESLDDLF
DEG_APCC_DBOX_1
0.6667
p.T718K
DO228985
LICA
ICGC
PRESLDDLF
DEG_APCC_DBOX_1
0.7306
p.P717T
DO229019
LICA
ICGC
PRESLDDLF
DEG_APCC_DBOX_1
0.7031
p.V707L
DO24556
LUAD
ICGC
PRESLDDLF
DEG_APCC_DBOX_1
0.1667
p.K721N
DO41235
UCEC
ICGC
PRESLDDLF
DEG_APCC_DBOX_1
0.6918
p.E712G
LU-165
lung
COSMIC
PRESLDDLF
DEG_APCC_DBOX_1
0.75
Drug responses associated with HPS5 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PRESLDDLF
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9UPZ3
Hermansky-Pudlak syndrome 5 protein
DEG_APCC_DBOX_1
713:721
PRESLDDLF
APC,CDC20,FZR1
0.581
More...