DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PRFTPLES
Uniprot ID:
Q58EX2
Source protein:
Protein sidekick-2
Source gene:
SDK2
Class:
DEG_SCF_FBW7_1
Location:
450:457
E3 ligase:
FBXW7
DEGRON score:
0.548
ASA_SCORE:
76.4625
COIL:
0.5134
CONS_SCORE:
0.4104
DSS_SCORE:
0.3046
HELIX:
0.0128
FCONS_SCORE:
0.9813
RIG_SCORE:
0.7688
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R451H
TCGA-A5-A0G2
UCEC
TCGA
PRFTPLES
DEG_SCF_FBW7_1
0.7133
p.R451H
DO41235
UCEC
ICGC
PRFTPLES
DEG_SCF_FBW7_1
0.7133
p.R440C
TCGA-AA-A01R
COAD
TCGA
PRFTPLES
DEG_SCF_FBW7_1
0.0556
p.R440C
DO7934
COAD
ICGC
PRFTPLES
DEG_SCF_FBW7_1
0.0556
p.S457L
TCGA-EE-A2MS
SKCM
TCGA
PRFTPLES
DEG_SCF_FBW7_1
0.7667
p.S457L
DO233634
GACA
ICGC
PRFTPLES
DEG_SCF_FBW7_1
0.7667
p.S457L
DO37567
SKCM
ICGC
PRFTPLES
DEG_SCF_FBW7_1
0.7667
p.L461H
SIDM00541
Colorectal Carcinoma
GDSC
PRFTPLES
DEG_SCF_FBW7_1
0.2222
p.L461H
ACH-000926
Colon/Colorectal Cancer
CCLE
PRFTPLES
DEG_SCF_FBW7_1
0.2222
p.L461H
HT55
large_intestine
COSMIC
PRFTPLES
DEG_SCF_FBW7_1
0.2222
p.R440H
SIDM00537
Colorectal Carcinoma
GDSC
PRFTPLES
DEG_SCF_FBW7_1
0.0556
p.R440H
ACH-000982
Colon/Colorectal Cancer
CCLE
PRFTPLES
DEG_SCF_FBW7_1
0.0556
p.R440H
ACH-001345
Colon/Colorectal Cancer
CCLE
PRFTPLES
DEG_SCF_FBW7_1
0.0556
p.R440H
GP5d
large_intestine
COSMIC
PRFTPLES
DEG_SCF_FBW7_1
0.0556
Drug responses associated with SDK2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PRFTPLES
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q58EX2
Protein sidekick-2
DEG_SCF_FBW7_1
450:457
PRFTPLES
FBXW7
0.548
More...