DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PRGCLPSID
Uniprot ID:
Q5JR98
Source protein:
Dynein light chain Tctex-type 4
Source gene:
DYNLT4
Class:
DEG_APCC_DBOX_1
Location:
28:36
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8136
ASA_SCORE:
91.2333
COIL:
0.8334
CONS_SCORE:
0.3212
DSS_SCORE:
0.7018
HELIX:
0.1402
FCONS_SCORE:
1.0825
RIG_SCORE:
0.6346
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R27Q
TCGA-2W-A8YY
CESC
TCGA
PRGCLPSID
DEG_APCC_DBOX_1
0.3056
p.R27Q
DO223732
CESC
ICGC
PRGCLPSID
DEG_APCC_DBOX_1
0.3056
p.G44R
TCGA-2Y-A9H3
LIHC
TCGA
PRGCLPSID
DEG_APCC_DBOX_1
0.1111
p.G44R
DO219525
LIHC
ICGC
PRGCLPSID
DEG_APCC_DBOX_1
0.1111
p.R27G
TCGA-EO-A22U
UCEC
TCGA
PRGCLPSID
DEG_APCC_DBOX_1
0.3056
p.R27G
DO43755
UCEC
ICGC
PRGCLPSID
DEG_APCC_DBOX_1
0.3056
p.R27W
DO233111
GACA
ICGC
PRGCLPSID
DEG_APCC_DBOX_1
0.3056
p.S34I
DO233652
GACA
ICGC
PRGCLPSID
DEG_APCC_DBOX_1
0.623
p.I35T
DO232054
ORCA
ICGC
PRGCLPSID
DEG_APCC_DBOX_1
0.7078
p.V26A
DO229253
THCA
ICGC
PRGCLPSID
DEG_APCC_DBOX_1
0.2778
p.P40R
ACH-001193
Bone Cancer
CCLE
PRGCLPSID
DEG_APCC_DBOX_1
0.2222
Drug responses associated with DYNLT4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PRGCLPSID
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5JR98
Dynein light chain Tctex-type 4
DEG_APCC_DBOX_1
28:36
PRGCLPSID
APC,CDC20,FZR1
0.8136
More...