DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PRGLLPGLL
Uniprot ID:
Q6P2E9
Source protein:
Enhancer of mRNA-decapping protein 4
Source gene:
EDC4
Class:
DEG_APCC_DBOX_1
Location:
677:685
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.999
ASA_SCORE:
72.6889
COIL:
0.8348
CONS_SCORE:
0.3157
DSS_SCORE:
0.567
HELIX:
0.1088
FCONS_SCORE:
1.0454
RIG_SCORE:
0.6506
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R678S
TCGA-AA-A01P
COAD
TCGA
PRGLLPGLL
DEG_APCC_DBOX_1
0.7427
p.R678S
DO8642
COAD
ICGC
PRGLLPGLL
DEG_APCC_DBOX_1
0.7427
p.S668G
TCGA-BR-4361
STAD
TCGA
PRGLLPGLL
DEG_APCC_DBOX_1
0.0833
p.S668G
DO38887
STAD
ICGC
PRGLLPGLL
DEG_APCC_DBOX_1
0.0833
p.A687T
TCGA-CG-5723
STAD
TCGA
PRGLLPGLL
DEG_APCC_DBOX_1
0.2778
p.A687T
DO38376
STAD
ICGC
PRGLLPGLL
DEG_APCC_DBOX_1
0.2778
p.P682S
TCGA-D5-6530
COAD
TCGA
PRGLLPGLL
DEG_APCC_DBOX_1
0.5641
p.P682S
DO8312
COAD
ICGC
PRGLLPGLL
DEG_APCC_DBOX_1
0.5641
p.P686S
TCGA-EE-A2GO
SKCM
TCGA
PRGLLPGLL
DEG_APCC_DBOX_1
0.3056
p.P686S
DO37823
SKCM
ICGC
PRGLLPGLL
DEG_APCC_DBOX_1
0.3056
p.S670N
DO234462
ESAD
ICGC
PRGLLPGLL
DEG_APCC_DBOX_1
0.1389
p.A675G
DO230950
LUSC
ICGC
PRGLLPGLL
DEG_APCC_DBOX_1
0.2778
p.A675G
DO224638
LUSC
ICGC
PRGLLPGLL
DEG_APCC_DBOX_1
0.2778
p.L684P
DO229268
THCA
ICGC
PRGLLPGLL
DEG_APCC_DBOX_1
0.7582
p.P688A
SIDM01126
Small Cell Lung Carcinoma
GDSC
PRGLLPGLL
DEG_APCC_DBOX_1
0.25
p.P688A
NCI-H64
lung
COSMIC
PRGLLPGLL
DEG_APCC_DBOX_1
0.25
p.A675E
ACH-001645
Skin Cancer
CCLE
PRGLLPGLL
DEG_APCC_DBOX_1
0.2778
Drug responses associated with EDC4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PRGLLPGLL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6P2E9
Enhancer of mRNA-decapping protein 4
DEG_APCC_DBOX_1
677:685
PRGLLPGLL
APC,CDC20,FZR1
0.999
More...