DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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Degron:
PRGPLPTLQ
Uniprot ID:
O43734
Source protein:
E3 ubiquitin ligase TRAF3IP2
Source gene:
TRAF3IP2
Class:
DEG_APCC_DBOX_1
Location:
562:570
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7921
ASA_SCORE:
89.2889
COIL:
0.9294
CONS_SCORE:
0.5726
DSS_SCORE:
0.3744
HELIX:
0.019
FCONS_SCORE:
0.9439
RIG_SCORE:
0.71
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P558H
TCGA-G7-A8LB
KIRP
TCGA
PRGPLPTLQ
DEG_APCC_DBOX_1
0.6667
p.Q570K
SIDM00898
Breast Carcinoma
GDSC
PRGPLPTLQ
DEG_APCC_DBOX_1
0.5833
p.Q570K
AU565
breast
COSMIC
PRGPLPTLQ
DEG_APCC_DBOX_1
0.5833
p.Q561K
AU565
breast
COSMIC
PRGPLPTLQ
DEG_APCC_DBOX_1
0.3056
p.Q560K
AU565
breast
COSMIC
PRGPLPTLQ
DEG_APCC_DBOX_1
0.2778
p.P557H
DO51553
KIRP
ICGC
PRGPLPTLQ
DEG_APCC_DBOX_1
0.1944
p.P555A
DO228935
COCA
ICGC
PRGPLPTLQ
DEG_APCC_DBOX_1
0.1389
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Drug responses associated with TRAF3IP2 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of PRGPLPTLQ
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O43734
E3 ubiquitin ligase TRAF3IP2
DEG_APCC_DBOX_1
562:570
PRGPLPTLQ
APC,CDC20,FZR1
0.7921
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