DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PRGSLVSLL
Uniprot ID:
Q9UQ05
Source protein:
Potassium voltage-gated channel subfamily H member 4
Source gene:
KCNH4
Class:
DEG_APCC_DBOX_1
Location:
754:762
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9354
ASA_SCORE:
79.1556
COIL:
0.7921
CONS_SCORE:
0.3329
DSS_SCORE:
0.4092
HELIX:
0.1294
FCONS_SCORE:
1.0427
RIG_SCORE:
0.6877
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E764K
TCGA-5M-AAT6
COAD
TCGA
PRGSLVSLL
DEG_APCC_DBOX_1
0.2778
p.E764K
DO223703
COAD
ICGC
PRGSLVSLL
DEG_APCC_DBOX_1
0.2778
p.F769L
TCGA-DF-A2KV
UCEC
TCGA
PRGSLVSLL
DEG_APCC_DBOX_1
0.1389
p.F769L
DO219771
UCEC
ICGC
PRGSLVSLL
DEG_APCC_DBOX_1
0.1389
p.P754H
DO229035
LICA
ICGC
PRGSLVSLL
DEG_APCC_DBOX_1
0.6583
p.F769V
DO36556
READ
ICGC
PRGSLVSLL
DEG_APCC_DBOX_1
0.1389
p.S757F
SIDM00007
Other Solid Cancers
GDSC
PRGSLVSLL
DEG_APCC_DBOX_1
0.6871
p.S757F
ACH-001550
Skin Cancer
CCLE
PRGSLVSLL
DEG_APCC_DBOX_1
0.6871
Drug responses associated with KCNH4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PRGSLVSLL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9UQ05
Potassium voltage-gated channel subfamily H member 4
DEG_APCC_DBOX_1
754:762
PRGSLVSLL
APC,CDC20,FZR1
0.9354
More...